New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3467129 =50 (0.450)4 (0.040) 4/506 NT 7.7% intergenic (‑140/+29) bfd/chiA bacterioferritin‑associated ferredoxin/periplasmic endochitinase
?NC_000913 3467151 = 48 (0.450)intergenic (‑162/+7) bfd/chiA bacterioferritin‑associated ferredoxin/periplasmic endochitinase

CTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGTC  >  NC_000913/3466845‑3467406
                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                     
ccatcccaataagagcgatgcagaaattgacgctatgatgggtaccacgccgatggttggcgtgaacgacgttcagggcgaggtgttctatctctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGa                                                                                                                                                                                                                                                                                   >  2:917173‑M1/285‑289 (MQ=255)
ccaacccaatgagggcggtgcagaaattgacggtatgatgggtaccacgccgatggttggcgtgaacgacgttcagggcgaggtgttctatctctctgatggtcgtcttggcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGa                                                                                                                                                                                                                                                                                   >  1:725045‑M1/285‑289 (MQ=255)
  atcccaataagagcgatgcagaaattgacgctatgatgggtaccacgccgatggttggcgtgaacgacgttcagggcgaggtgttctatctctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGATa                                                                                                                                                                                                                                                                                 >  2:276493‑M1/283‑289 (MQ=255)
   cACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGAt                                                                                                                                                                                                                                                                                  >  2:727797/1‑287 (MQ=255)
            cccGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGt                                                                                                                                                                                                                                                                        <  2:127533/288‑1 (MQ=255)
                                                                              gggAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTTCTTAGTAAACGGCACGAAGATTTCGCTAAATGCGTACTTCGGTg                                                                                                                                                                                                         >  2:368945/1‑285 (MQ=255)
                                                                               ggAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      <  1:727797/287‑1 (MQ=255)
                                                                                             ctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGATACCTTCCAGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGt                                                                                                                                                                                                          >  2:91870‑M1/192‑269 (MQ=255)
                                                                                             ctctgatgctcgtctggtcatgcaggatgcgcagaagcgtaatctcggtatggttggtatctggtcaatcgcgcgcgacctgccgggcggcactaacctgtctccggaattccacggcctgactaaagaacaggcaccgaagtacgcatttagcgaaatcttcgcgccgtttactaagcaataaatgtgttGGCGATACCTTCCAGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGt                                                                                                                                                                                                          <  1:91870‑M1/78‑1 (MQ=255)
                                                                                                  tGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGa                                                                                                                                                                                 >  2:786753/1‑289 (MQ=255)
                                                                                                                          ccATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTgccgc                                                                                                                                                         <  2:737200/289‑1 (MQ=255)
                                                                                                                                     aCAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTc                                                                                                                                               >  2:678855/1‑288 (MQ=255)
                                                                                                                                       aaaCGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTcgcg                                                                                                                                            <  1:678855/289‑1 (MQ=255)
                                                                                                                                                   agaCTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      <  1:447130/219‑1 (MQ=255)
                                                                                                                                                   agaCTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      >  2:447130/1‑219 (MQ=255)
                                                                                                                                                                 tttCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTTCCGCCCGCGACGTCGCGCGCGGTTGACCTGATACCAACCATa                                                                                                                   >  2:914513/1‑288 (MQ=255)
                                                                                                                                                                     ttcAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTAtt                                                                                                                                                                                                                                                      <  1:959752/153‑1 (MQ=255)
                                                                                                                                                                     ttcAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTAtg                                                                                                                                                                                                                                                      >  2:959752/1‑152 (MQ=255)
                                                                                                                                                                                               aTTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATg                                                                                     >  2:31763/1‑288 (MQ=255)
                                                                                                                                                                                                              aGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCag                                                                     <  1:138618/289‑1 (MQ=255)
                                                                                                                                                                                                                 ctctTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCagag                                                                   <  1:786753/288‑1 (MQ=255)
                                                                                                                                                                                                                      ttttAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATacca                                                                                                                         <  1:206740/229‑1 (MQ=255)
                                                                                                                                                                                                                      ttttAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATacca                                                                                                                         >  2:206740/1‑229 (MQ=255)
                                                                                                                                                                                                                                aGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              <  2:152344/262‑1 (MQ=255)
                                                                                                                                                                                                                                aGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              >  1:152344/1‑262 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      >  2:661229/1‑130 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCt                                                                                                                                                                                                      <  1:661229/130‑1 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAt                                                                        >  1:965908/1‑256 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAt                                                                        <  2:965908/256‑1 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcgtcgt                                       >  2:554491/1‑289 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAAcgtcgt                                       >  1:14287/1‑289 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCACGCCCTGAAcgtcgt                                       >  2:828919/1‑289 (MQ=255)
                                                                                                                                                                                                                                            tGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAAACATCCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATCGAACACACCGCCCGGAAcggcgt                                       >  2:544466/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         tGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGa                                                            >  1:193334/1‑255 (MQ=255)
                                                                                                                                                                                                                                                         tGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGa                                                            <  2:193334/255‑1 (MQ=255)
                                                                                                                                                                                                                                                              tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATCCCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTCCACGCCAACCATCGGCg                     >  1:674924/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCg                     <  1:31763/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCg                     >  2:915047/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCCCGCGCGATTGACCAGATACCAACCATACCGAGCTTACGCTTCTGCGCATCCTGCATGACCAGCCGCGCATCAGAGAGATACCACACCCTGCCCTGAACCTCCCTCACGCCAACCATCGGc                      >  2:930502/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                ccAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATCTATTGCTTAGTAAACGGCGCGACGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGCATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGCTTAGCCGTCGGCGCACCCTGCATGCCCAGACGTGCCTCCGACAGATAGAACACCTCGCCCTGCACGTCGTTCACCCCCACCATCGGcacg                   >  2:370133/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                     aGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTAc               >  1:783788/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                      gTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTCCGCATCCTGCACGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGCACGTCGTTCACGCCAACCATCGGCGTGGTAcc              >  2:260995/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              <  1:710794/220‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGAc                                                                              >  2:710794/1‑220 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:635816/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:160131/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:437349/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:591744/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  1:989332/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  2:301035/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCGCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACccacca         >  2:486431/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCAACAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCcatca         >  2:278282/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aagcaataaatgtgttGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTg                   <  1:337679‑M1/261‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aagcaataaatgtgttGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTg                   >  2:337679‑M1/17‑277 (MQ=255)
                                                                                                                                                                                                                                                                               tGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCg    >  1:524726/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                gACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGt   <  1:554491/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 aCAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGTc  <  2:524726/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                     
CTTCACGCGCGGCCCGGACACATTTACCGCACTGATTGCCGACCGGAATAAATTTTTTTAATTGCTGGAACGAGTGAGGGGAAAACTGGCGCACAGCCTGACGAATTTTTTTATCGCTGATACCATTACAAAGACAAACGTACATAGAGACTCCCGTATACTTTCTTCAAAAATAAATGAAAATAGTTCTTATTTCAATTACGGAAAGACTCTTTTTTAAGCAAAGAATAGAAATATGAATAAAAATAATGGGCTACCAAAAGTAGCCCATTGACAAAAAATGCGGCGATACTGGAAGGTATCGCCAACACATTTATTGCTTAGTAAACGGCGCGAAGATTTCGCTAAATGCGTACTTCGGTGCCTGTTCTTTAGTCAGGCCGTGGAATTCCGGAGACAGGTTAGTGCCGCCCGGCAGGTCGCGCGCGATTGACCAGATACCAACCATACCGAGATTACGCTTCTGCGCATCCTGCATGACCAGACGAGCATCAGAGAGATAGAACACCTCGCCCTGAACGTCGTTCACGCCAACCATCGGCGTGGTACCCATCATAGCGTC  >  NC_000913/3466845‑3467406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.