New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1097294	15 (0.220)	9 (0.140)	8/266	7.4	47.2%	intergenic (+465/+271)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
	?	NC_000913	= 1097455	6 (0.090)					intergenic (+626/+110)	ycdU/serX	putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

CAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTC  >  NC_000913/1097153‑1097436                                                                                                                                              |                                                                                                                                               cAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGt                                                                                                                                               >  1:1134141/1‑143 (MQ=32)  aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTc                                                                                                                                              <  1:1057938/143‑1 (MQ=32)  aaTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTc                                                                                                                                              <  2:1105402/143‑1 (MQ=32)                                                                                                               tCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTATCATCCCCACGGTGTGTGCAATATAGGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATCTGGCGGTGAGGGGGGGATTGAc                                 >  1:478589/1‑143 (MQ=255)                                                                                                                    gTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCACCATACGAAAAAACAGCCCGTACTTTCGTACGAGCTCGTCTTTAAATAAGGCCGTGAGGGGGGGactcaccgccc                            >  2:646629/1‑133 (MQ=1)                                                                                                                     tCTGTCCAACTGGCTGTCGGCAGTTGTCGAAGGTCGGTGGGGGCGGCGCACCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGA‑GGGGGGATTGACtcgcttc                          <  1:601970/143‑1 (MQ=11)                                                                                                                        gTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcgc                        <  1:1000774/143‑1 (MQ=34)                                                                                                                           cAACTGGCTGTCGCCAGTTGTCGAACCCCGGTTGGGGCTTCTCATGGCCCGGGTGTGTGCAATAGAGTAAAAATAAGCGCGTGCTGTCGTACGAGCTCTTCTATAAATATGGCGGTGAGGGGGGGATTGACTCGCGtcgatcg                     >  2:619322/1‑143 (MQ=11)                                                                                                                                    gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg                     <  1:866216/134‑1 (MQ=35)                                                                                                                                    gTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg                     >  2:866216/1‑134 (MQ=35)                                                                                                                                       gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgc                             <  1:935683/123‑1 (MQ=35)                                                                                                                                       gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgc                             >  2:935683/1‑123 (MQ=35)                                                                                                                                       gCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAg         >  1:451107/1‑143 (MQ=35)                                                                                                                                           gTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATGTGGCGGTGAGGGGGGGGTTGACGGGCTTGGTTCGCTCTGCGGGCGGCCCg     >  1:473555/1‑143 (MQ=11)                                                                                                                                              gTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTGGCTTCGCTCGCCCTGCGGGCTGCGCGCtg  >  2:1121022/1‑142 (MQ=255)                                                                                                                                              |                                                                                                                                               CAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTC  >  NC_000913/1097153‑1097436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.