New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)65 (0.960) 54/282 0.2 91.5% intergenic (+9/‑768) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 = 1293039 6 (0.090)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

Only 100 of 143 total aligned reads displayed.

TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCT  >  NC_000913/1292897‑1293181
                                                                                                                                              |                                                                                                                                              
ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGCGGTGATCATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGATCTTTATTTTGTgccg                                                                                                                                                >  1:718208/1‑143 (MQ=255)
ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                                <  1:988814/143‑1 (MQ=255)
  tccgggggttcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaagaacaccatcatacactaagtcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                              >  2:621206‑M1/134‑143 (MQ=255)
   aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGCTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCAGggt                                                                                                                                             <  1:1149253‑M2/143‑4 (MQ=255)
     ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaat                                                                                                                                           <  2:695270‑M1/13‑1 (MQ=255)
     aaTGTTAAGTGCTTCGCTTATTGTAGTAATCTCAAACTGATATTGGGGTGGTTTGCTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaa                                                                                                                                           >  1:1151824‑M2/1‑138 (MQ=255)
       ttttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTCAGGCATTCAAAATTGTTCTTTATTTTGTGCCGggtaatg                                                                                                                                         <  1:1116803‑M2/143‑8 (MQ=255)
       cggtgctgttgccgttccgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataa                                                                                                                                         >  2:567573‑M1/129‑143 (MQ=255)
        tttGAGTGCTTCGCTCATTGTAGTAATTTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGACTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                        >  2:773138‑M2/1‑135 (MQ=255)
        tttAAGTGCTTCGCTCAGTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                        >  2:199310‑M2/1‑135 (MQ=255)
        gttaAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                        >  2:1012539‑M2/2‑135 (MQ=255)
         ttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGCAATTCAAAATTGTTCTTTATTTTGTGCCGggtacggac                                                                                                                                       <  2:75155‑M2/143‑10 (MQ=255)
              tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                                  <  2:677746‑M2/143‑15 (MQ=255)
               ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCttt                                                                                                                                 >  1:64445‑M1/121‑143 (MQ=255)
                 gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcgtacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                                                               >  1:12800‑M1/119‑143 (MQ=255)
                    tctCATTGTAGTAATCTCAACCTTGTATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatt                                                                                                                            >  2:1009946‑M2/2‑123 (MQ=255)
                           accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctgaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATtaa                                                                                                                     <  2:734761‑M1/35‑2 (MQ=255)
                             caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGcc                                                                                                                   <  1:928130‑M1/37‑1 (MQ=255)
                              gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                          >  1:882366‑M2/1‑113 (MQ=255)
                              gtaATCTCAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCATGACTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                                  >  2:155723‑M2/1‑113 (MQ=255)
                                 aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                               >  1:1143252‑M2/1‑110 (MQ=255)
                                    tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                            <  2:1177832‑M2/143‑37 (MQ=255)
                                    tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTCGTGCCGggtaatgactccaactacttgagagtgtgtgatgtg                                                                                                            <  2:1092993‑M2/143‑37 (MQ=255)
                                        aCTTATATTGGTGTGGTTTGTTTATTTAATAATAGATCCTTAAATTCAGTTGTGCAATAGCCAAGAAAGAAAGGAATTCAAAATTGTGCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                        >  1:675320‑M2/1‑103 (MQ=255)
                                         cTTATATTGGGGTGGTCTGTTGAAGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                       >  1:490823‑M2/1‑102 (MQ=255)
                                           tataTTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataa                                                                                                     >  1:146326‑M2/1‑100 (MQ=255)
                                           ctgaacaggagggacagctgatagacacagaagccacttgagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGc                                                                                                     >  2:663299‑M1/93‑143 (MQ=255)
                                                caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                                <  1:939‑M1/56‑1 (MQ=255)
                                                caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                                >  1:819303‑M1/88‑143 (MQ=255)
                                                  gtgtggtttGGTGTGTTAATAATAGAGCGTTAAAGTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGGGCCGggtaatgactccaacttattgatagtgttttatgttctgataatgcccga                                                                                              >  1:823164‑M2/3‑93 (MQ=255)
                                                   gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGcc                                                                                             <  1:806539‑M1/59‑1 (MQ=255)
                                                   gagcgacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagctggcagcatcaccTTGTGCCGCCAATAAATACCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGcc                                                                                             >  1:468878‑M1/85‑143 (MQ=255)
                                                          agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                                                               <  1:1107267‑M1/9‑1 (MQ=255)
                                                          agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                                                               >  2:1107267‑M1/78‑86 (MQ=255)
                                                            ttgAGGTAATAATAGAGCCTTAGATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgaccttgtc                                                                                    >  1:112601‑M2/1‑83 (MQ=255)
                                                            ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAACAGACGCGGCATATAGCCCTATTTaca                                                                                    <  2:372156‑M1/68‑1 (MQ=255)
                                                            ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                                    <  1:533942‑M1/68‑1 (MQ=255)
                                                             tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                   <  2:445938‑M1/69‑1 (MQ=255)
                                                                ggTAATAATAGAGCCTTGAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                                >  2:1042136‑M2/1‑79 (MQ=255)
                                                                ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcccacttattgatagtgttctatgttcagatcctgcccgatgcctttgtcatgc                                                                                <  2:127780‑M2/143‑65 (MQ=255)
                                                                 gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTGTTTTGTGGCGggaaattactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                               <  1:865761‑M2/143‑66 (MQ=255)
                                                                      aataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcccc                                                                          <  2:918576‑M2/143‑71 (MQ=255)
                                                                       agcagccactcgagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatctccTTGGGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTc                                                                         >  1:785107‑M1/65‑143 (MQ=255)
                                                                        gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                                                                        >  2:278619‑M1/64‑143 (MQ=255)
                                                                            ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAGATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTCTTTACACCGATGATTTCgcagc                                                                    <  2:148319‑M1/84‑1 (MQ=255)
                                                                                    ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgctgtctttgtcatgccgctccaccgaatttgagaa                                                            <  2:938526‑M2/143‑85 (MQ=255)
                                                                                    ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                            >  1:1021984‑M2/1‑59 (MQ=255)
                                                                                     tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                           >  2:593034‑M2/1‑58 (MQ=255)
                                                                                     cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                           >  2:976395‑M1/51‑143 (MQ=255)
                                                                                        ctcaaaaacaccatcatacacgaaatcagtaagttggcagcatccccTTGTGCCGCCAATAGATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCTCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                        >  2:505289‑M1/48‑143 (MQ=255)
                                                                                        cgcaaaaacaccatcatacactaaatgagtaagttggcagcagcaccATGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                        >  2:337645‑M1/48‑143 (MQ=255)
                                                                                         ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgagagtgtgttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaacgcca                                                       <  2:889510‑M2/143‑90 (MQ=255)
                                                                                         tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGCGGTTaaa                                                       <  2:646621‑M1/97‑1 (MQ=255)
                                                                                         tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                                       <  2:608182‑M1/97‑1 (MQ=255)
                                                                                          caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                                      <  1:1016547‑M1/98‑1 (MQ=255)
                                                                                           gtgtAATGGCCAGGAATGTAATGAATTGAAAGTGGTTCTTTATTTTGTGCCGggtaatgactccaacttatttatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                     >  2:1082806‑M2/1‑52 (MQ=255)
                                                                                              cAATAGCCAGGAATGTAAGGAATTCAAAATGGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                  >  1:428676‑M2/1‑49 (MQ=255)
                                                                                                caccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCt                                                <  1:965440‑M1/104‑1 (MQ=255)
                                                                                                 tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc                                               >  1:1112984‑M2/1‑46 (MQ=255)
                                                                                                  ccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                              <  1:810519‑M1/106‑1 (MQ=255)
                                                                                                   catcatacactaaatcagtgagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                             <  2:808628‑M1/107‑1 (MQ=255)
                                                                                                    ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                            <  2:706873‑M2/143‑101 (MQ=255)
                                                                                                    ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                            <  1:576223‑M2/143‑101 (MQ=255)
                                                                                                    atcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                            <  1:912035‑M1/108‑1 (MQ=255)
                                                                                                    accatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                            >  1:32379‑M1/36‑143 (MQ=255)
                                                                                                     tcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc                                           <  2:208612‑M1/109‑1 (MQ=255)
                                                                                                      catacactaaatcagtaagttggcagcatcaccTTGTGCCGCCACTTGAGATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCa                                          >  1:740818‑M1/34‑143 (MQ=255)
                                                                                                      aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc                                          >  2:708117‑M2/1‑41 (MQ=255)
                                                                                                         acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                                       >  2:757272‑M1/31‑143 (MQ=255)
                                                                                                          agttaagGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagatgatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                      >  2:452370‑M2/4‑37 (MQ=255)
                                                                                                          aTGTAAGTAATTCAAAATTTTTCTTTATTTTGTGCCGggttatgactccaacttattgatagtgttttctgtacatgtaaggcccgatgactctgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                      >  2:141391‑M2/1‑37 (MQ=255)
                                                                                                             tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccggtgactttgtcatgcagctccacagatattgagaccgacagcgacgaccatcccggccgt                                   <  2:371772‑M2/143‑110 (MQ=255)
                                                                                                             tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                   >  2:1001728‑M2/1‑34 (MQ=255)
                                                                                                              aaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAt                                  <  1:485196‑M1/118‑1 (MQ=255)
                                                                                                              aaGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcctgcagctccaccgattttcagaacgacagcgacttccgtcccagcaatg                                  <  2:837063‑M2/143‑111 (MQ=255)
                                                                                                               aatcagtaagtgggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                                 >  2:731657‑M1/25‑143 (MQ=255)
                                                                                                               aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtcatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacctccggcccagccgtgc                                 <  2:420024‑M2/143‑112 (MQ=255)
                                                                                                               aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                                 <  2:415222‑M2/143‑112 (MQ=255)
                                                                                                                 tcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCacgtcacactat                               <  2:156626‑M1/121‑5 (MQ=255)
                                                                                                                 tcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGCCACAtttt                               <  2:278462‑M1/121‑1 (MQ=255)
                                                                                                                 gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcca                               <  1:592046‑M2/143‑114 (MQ=255)
                                                                                                                  cagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa                              <  2:173522‑M1/122‑1 (MQ=255)
                                                                                                                    ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                            <  1:204588‑M2/143‑117 (MQ=255)
                                                                                                                         ttggcggcatcgccGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCGATGTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgag                       >  2:19344‑M1/15‑143 (MQ=255)
                                                                                                                         ttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTCTGCGgag                       <  2:794178‑M1/129‑1 (MQ=255)
                                                                                                                         aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                       >  1:371485‑M2/1‑22 (MQ=255)
                                                                                                                          tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTCCACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAttt                                >  1:619769‑M1/14‑133 (MQ=255)
                                                                                                                           ttGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                     >  1:415222‑M2/1‑20 (MQ=255)
                                                                                                                            tGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                    >  1:8433‑M2/1‑19 (MQ=255)
                                                                                                                              agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTAt                  <  2:1044380‑M1/134‑1 (MQ=255)
                                                                                                                                cTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgccttccgtcccagccgtgccaggtgctgcctccgat                <  2:234018‑M2/143‑129 (MQ=255)
                                                                                                                                  tcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGCGATTATCGTa              <  1:198544‑M1/138‑1 (MQ=255)
                                                                                                                                   caccTTGTGCCTGCAATACATATCGTTGCATAACACGAGCGAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAg             >  2:1152372‑M1/5‑143 (MQ=255)
                                                                                                                                    aTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag            >  1:697673‑M2/1‑11 (MQ=255)
                                                                                                                                      cTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATGGtagggt          <  1:816816‑M1/142‑3 (MQ=255)
                                                                                                                                         gtgCCGTCAATAAATCTCCTTTCATGACTTTAGCCACAAATGTCCTCGCTCGTAGCCCTAATTAAACCGATGATTTCGCAGCACGTAAGGGCATACCTCCCTGATTCATGTCTCATTTTATGGGGAGATTATCGTAGGCTgac       <  2:775189/143‑1 (MQ=255)
                                                                                                                                         gtgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTCTTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgac       <  2:586227/143‑1 (MQ=255)
                                                                                                                                         gtgCCGCCAATAAATATCTTTTCATAAAAGTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgac       <  1:677016/143‑1 (MQ=255)
                                                                                                                                           gccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacga     <  1:77279/143‑1 (MQ=255)
                                                                                                                                             cGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg   <  1:1010602‑M2/143‑142 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCT  >  NC_000913/1292897‑1293181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.