New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 29486479 (1.160)7 (0.110) 7/264 7.9 8.7% intergenic (‑65/+275) yagM/yagN CP4‑6 prophage, uncharacterized protein/CP4‑6 prophage, uncharacterized protein
?NC_000913 = 294873 73 (1.150)intergenic (‑74/+266) yagM/yagN CP4‑6 prophage, uncharacterized protein/CP4‑6 prophage, uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTGGGCGAGGTAGC  >  NC_000913/294732‑295014
                                                                                                                                             |                                                                                                                                              
ttGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCg                                                                                                                                               >  1:658072/1‑143 (MQ=255)
 tGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCgg                                                                                                                                              >  1:894405/1‑143 (MQ=255)
   ccTTGACAAGGTTTTTTTCATAGTAGAACGCTTCTCATCTCAAAATTATGAATACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCCCAGTGTTGACCCATTTTTCTCgggg                                                                                                                                            <  2:434993/143‑1 (MQ=255)
       gACAAGGTTTTTTTTTTTTTTTTACGCTGCTCATCTCAAAATTAGTAACACTTTTTGACATTTTTAAGGAAACCTTTTCGTTATCTCATTATAAAACTACTTTCTTATATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAAc                                                                                                                                        >  2:969457/1‑143 (MQ=255)
          aaGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCTCTTTTCTCGGGGCAACTTc                                                                                                                                     >  1:461808/1‑143 (MQ=255)
          aaGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATc                                                                                                                                     >  1:1046386/1‑143 (MQ=255)
           aagTTCTTTTCCTGGTAGAGCGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCGCTTTGTTATCTCACTATAACACTACTATCTGAAATTGCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCg                                                                                                                                    <  2:591360/141‑1 (MQ=255)
           aGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCg                                                                                                                                    <  1:159535/143‑1 (MQ=255)
             gTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTCTCTCGGGGCAACATCGCt                                                                                                                                  >  2:565011/1‑143 (MQ=255)
              tttttttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCta                                                                                                                                 <  1:1110456/143‑1 (MQ=255)
              tttttttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACACCGcga                                                                                                                                 >  1:355249/1‑141 (MQ=255)
               ttttttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCtat                                                                                                                                >  1:345015/1‑143 (MQ=255)
               ttgtttCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGTGCAACATCGCtat                                                                                                                                <  2:916155/140‑1 (MQ=255)
                   ttCCTGGTAGAACGCTGGTGATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAAt                                                                                                                            <  2:209812/143‑1 (MQ=255)
                      cTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCaa                                                                                                                         <  2:988778/143‑1 (MQ=255)
                           aGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATaaaa                                                                                                                    <  1:1032425/143‑1 (MQ=255)
                             aaCGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTGTCTCAGGGCAACATCGCTATAAAGCAATAAAAtt                                                                                                                  >  2:435021/1‑143 (MQ=255)
                               cGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaa                                                                                                                <  2:199313/143‑1 (MQ=255)
                                gctgctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaaa                                                                                                               <  1:1180884/143‑1 (MQ=255)
                                gctgctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTaaa                                                                                                               <  1:819086/143‑1 (MQ=255)
                                   gctCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCt                                                                                                            <  2:57734/143‑1 (MQ=255)
                                       aTCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTaa                                                                                                        <  1:766332/143‑1 (MQ=255)
                                        tctcAAAGTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAACTCAATAAAATTAAATCTGTAAt                                                                                                       >  2:498805/1‑143 (MQ=255)
                                          tcAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAAttt                                                                                                     >  1:250028/1‑143 (MQ=255)
                                          tcAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAAttt                                                                                                     >  1:817962/1‑143 (MQ=255)
                                           cAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATtta                                                                                                    >  2:1172376/1‑143 (MQ=255)
                                             aaaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatt                                                                                                  <  1:881742/143‑1 (MQ=255)
                                              aaTTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATttatta                                                                                                 <  2:548036/143‑1 (MQ=255)
                                                 tAGTAACATTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAg                                                                                              <  2:754807/143‑1 (MQ=255)
                                                      acacTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACttt                                                                                         >  2:304804/1‑143 (MQ=255)
                                                         cTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtctc                                                                                      <  1:969457/143‑1 (MQ=255)
                                                         cTATTAGACATTCTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCTGGGCAACATCGCTATAAATCAATAAAATTAATTCTGTAATTTATTACAGACTTtctc                                                                                      <  2:382068/143‑1 (MQ=255)
                                                         cTATTACACATTTTTAAGTAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTTTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTtctc                                                                                      <  1:448439/143‑1 (MQ=255)
                                                          tATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCg                                                                                     >  1:191755/1‑143 (MQ=255)
                                                          tATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCg                                                                                     >  1:374628/1‑143 (MQ=255)
                                                             tAGACATTGTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCTCTTTTTCTCGGTGCAACATGGCTAGAAATTAATAAAATTACATCCTTAATTCATTACGAACTTTCTCGTAc                                                                                  >  2:749810/1‑143 (MQ=255)
                                                               gACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTAGTACAg                                                                                >  2:396549/1‑143 (MQ=255)
                                                                aCATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGa                                                                               >  1:41573/1‑143 (MQ=255)
                                                                 cATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCACATTTTTCTCCGGGCAACACCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTCCTCGTCCAGaa                                                                              >  2:780248/1‑143 (MQ=255)
                                                                  aTTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGaaa                                                                             >  1:795744/1‑143 (MQ=255)
                                                                   gttttAAGGAAGCCTTTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCAATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGaaaa                                                                            <  2:512269/142‑1 (MQ=255)
                                                                    ttttAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAAt                                                                           <  1:250770/143‑1 (MQ=255)
                                                                        aaGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTAt                                                                       <  2:278612/143‑1 (MQ=255)
                                                                                 tctTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATCAAATTAAATCTGTAATTTCTTCCAGACTTTCTCGTACAGAAAATGTATCTATAAAAt                                                              >  2:808881/1‑143 (MQ=255)
                                                                                 tctTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGATATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAAt                                                              >  1:997875/1‑143 (MQ=255)
                                                                                    ttGTTAGCTCAATATAAAACTACGATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGa                                                           <  2:824669/143‑1 (MQ=255)
                                                                                     ttgtATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGGTATAAATCAATAAAATTAAATCTGTACTTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:386337/140‑1 (MQ=255)
                                                                                     tGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:467924/143‑1 (MQ=255)
                                                                                     tGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  2:370112/143‑1 (MQ=255)
                                                                                     tGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:713516/143‑1 (MQ=255)
                                                                                     ggTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAg                                                          <  1:575712/142‑1 (MQ=255)
                                                                                          tctcAATATAAAGCTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACAt                                                     <  2:658072/143‑1 (MQ=255)
                                                                                          tctcAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATGTTTCTCGGGGCAACATCGCTATACATCAATAAAATTAAATCTGTAATTTATTACAAACTTTCTCTTACAGAAAAAGTATCTATAAAATCACGGACAt                                                     >  1:1188982/1‑143 (MQ=255)
                                                                                           ctcAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATc                                                    >  1:335610/1‑143 (MQ=255)
                                                                                              aatactaacctacaaTCACAACTTTCTCATTGTTGCCCCATTTTTCTCTGTGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:712/134‑1 (MQ=255)
                                                                                              aacataAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:854170/140‑1 (MQ=255)
                                                                                              aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:694537/143‑1 (MQ=255)
                                                                                              aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 >  1:861636/1‑143 (MQ=255)
                                                                                              aaTATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCttt                                                 <  2:756815/143‑1 (MQ=255)
                                                                                                    aaaCTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTaa                                           <  2:298622/143‑1 (MQ=255)
                                                                                                       ctactaTCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCa                                        <  2:653238/143‑1 (MQ=255)
                                                                                                             tCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATCAAATCGACGACAACATAACTTAACAACTAATg                                  >  2:1083409/1‑143 (MQ=255)
                                                                                                               tGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATggc                                >  1:44128/1‑143 (MQ=255)
                                                                                                                gAAATTTCTTAGTGTTTCCCCATTTTTCTCGTGCCAACATTGCTATAAATCAATAAAATTAAATCTGTCATTTATTACAGACTTTCGCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATggcg                               <  2:40149/143‑1 (MQ=255)
                                                                                                                        tcAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGa                       <  1:870833/143‑1 (MQ=255)
                                                                                                                         cAGTGTTGCCCCCTTTTTCTCGTGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAt                      <  1:6339/143‑1 (MQ=255)
                                                                                                                          aGTGTTGCCCCATTGTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGGACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAtt                     <  1:861294/143‑1 (MQ=255)
                                                                                                                           gtgtTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGAttt                    <  2:297041/143‑1 (MQ=255)
                                                                                                                              ttGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAAGTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGtt                <  2:204188/143‑1 (MQ=255)
                                                                                                                               tGCCCCATTTTTCTCGGGGCAACGTCGCTATAACTCCCTTGCATCAAATCTATAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGttt               <  1:1172376/143‑1 (MQ=255)
                                                                                                                                gCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGtttt              <  2:651556/143‑1 (MQ=255)
                                                                                                                                 ccccATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTg             <  1:806783/143‑1 (MQ=255)
                                                                                                                                  cccATTTTTCTCGGTGCAACATCGCTATAAATCAATACAATTAATTCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATCAAATCTCGTACATTTTTACGTATCCAGTAATGGCGGCCATTTATTTAGttttt             >  2:42357/1‑142 (MQ=255)
                                                                                                                                   ccATTGTTCACGGGGCAACATCGCTATAAATCAATAAAATTAAATCTCTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTggg           <  2:355249/143‑1 (MQ=255)
                                                                                                                                    cATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAGTGTATCTATAAAATCGAGGACATCTTTACGTAACAAGTAATGGCGGACATTGAGTTATTTTggga          >  2:453298/1‑142 (MQ=255)
                                                                                                                                      tttttCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTGGGCGa        <  2:814230/143‑1 (MQ=255)
                                                                                                                                        tttCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCGCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTGGGCGAgg      >  1:323608/1‑143 (MQ=255)
                                                                                                                                            tcGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCAGTGATTTGTTTTGGGCGAGGTAGc  >  1:980796/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TTGCCTTGACAAGGTTTTTTTCCTGGTAGAACGCTGCTCATCTCAAAATTAGTAACACTATTAGACATTTTTAAGGAAACCTCTTTGTTATCTCAATATAAAACTACTATCTGAAATTTCTCAGTGTTGCCCCATTTTTCTCGGGGCAACATCGCTATAAATCAATAAAATTAAATCTGTAATTTATTACAGACTTTCTCGTACAGAAAATGTATCTATAAAATCGAGGACATCTTTACGTAACCAGTAATGGCGGCCATTGATTTGTTTTGGGCGAGGTAGC  >  NC_000913/294732‑295014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.