New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2375833	5 (0.070)	74 (1.120)	62/274	0.0	93.8%	coding (128/963 nt)	menC	O‑succinylbenzoyl‑CoA synthase
	?	NC_000913	2514275 =	NA (NA)					intergenic (+33/‑54)	nupC/insL1	nucleoside (except guanosine) transporter/IS186 transposase

TGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACG  >  NC_000913/2514136‑2514405                                                                                                                                            |                                                                                                                                   tgaatgaaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATaa                                                                                                                                 <  1:29943/143‑1 (MQ=255)  gaatgaaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAg                                                                                                                                >  1:721660/1‑143 (MQ=255)  gaatgaaGAGCAAGGTAACGGGGGTTCTCGCGGCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAg                                                                                                                                <  1:290237/143‑1 (MQ=255)   aatgaaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAgc                                                                                                                               <  2:321765/143‑1 (MQ=255)      gaaGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCGTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATAGATAAAAAAGCCGGGGATAATTCCCATAAGCGCt                                                                                                                            >  1:996993/1‑143 (MQ=255)        agagCACGGGACCGTGGTTTCTGGCGCCGGGCCGAAGCGGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGGGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGTCCCATAAGCGCTaa                                                                                                                          <  1:368909/143‑1 (MQ=255)              aGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAg                                                                                                                    >  1:899277/1‑143 (MQ=255)              aGGTAACGGGGTTTCTCGCTGCGGTCTGAAGCGGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCGGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAg                                                                                                                    <  2:269596/143‑1 (MQ=255)                 tAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTGACGGGt                                                                                                                 >  2:954408/1‑143 (MQ=255)                       ggTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGt                                                                                                           >  2:164625/1‑143 (MQ=255)                       ggTTTCGCGCTTCGGTCTGAAGCTGGTTTACGGCTCTGCCCTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGt                                                                                                           <  2:504701/143‑1 (MQ=255)                            gccGCTGCGGTCCGACGCTGGTCTACGGCACTCCCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGGGCTGTAAGTCCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc                                                                                                      <  1:635972/141‑1 (MQ=38)                             tcGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGCTGTGGTGTTGCg                                                                                                     >  1:1147494/1‑143 (MQ=255)                             tcGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATAGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg                                                                                                     >  1:940896/1‑143 (MQ=255)                              cggtccGGTCTGTAGCTGGTTTACGGCTCTACCCTGGTGAGGGTGCTGTCGGCGTCAACCGCAGCACTGGTTCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    <  2:764907/138‑1 (MQ=38)                              cGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    >  1:880249/1‑143 (MQ=255)                                cTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTGAGACCATACATAAACAAGCCGGGGATAATTCCCATACCCCCTCACGTAAAGGCTGCGGTATCACCCCt                                                                                                  >  1:736324/1‑143 (MQ=255)                                 ttCGGTCTGATGCTGTTTTAGGGTTTTGTCTTGGTGGGTGTGGTGGGGGGGTCAATGGCAGCACTGGTGGTGAAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg                                                                                                 <  1:1005770/143‑1 (MQ=21)                                      tCTGAAGCTGGTTTACGGCTCTGCCCTGGTGAGTGTGCGGTCGGCGTCAATCGCAGCACTGGTGCTATCAGAACATACATCAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATCACGCCTGATATg                                                                                            >  2:321771/1‑143 (MQ=37)                                      tCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCGGTAGGACCATACATCAAAAAGCCGGGGATAATTCCCCTAAGCGCTCACTCCAGGGGTGTGGCATTACGCCCGatatt                                                                                            >  2:297468/1‑142 (MQ=255)                                        tGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt                                                                                          >  1:343075/1‑143 (MQ=255)                                          aaGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTCAGGGGTGTGGTATTACGCCTGATAGGAttt                                                                                        >  2:111583/1‑143 (MQ=255)                                          aaGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATCTGAttt                                                                                        >  2:797891/1‑143 (MQ=255)                                            gCTGGTTTAGGGCTCGTCCCTGGTGAGGGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                                                      <  2:1020417/143‑1 (MQ=37)                                              tGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTCAGACCCTACATAGAAAAGCCGGGGATAAGTCCCATAAGCGCTAACTTACGGGTCGAGGGAGCACGCCCGCAATGAGTTAAca                                                                                    >  2:1157477/1‑142 (MQ=255)                                              tGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACg                                                                                    <  1:842538/143‑1 (MQ=255)                                              tGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACg                                                                                    >  2:328921/1‑143 (MQ=255)                                               ggTTGACGGGTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAATACCATACATAAAAGAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGTGTTGTGGTATTATGCCTGATATGATTTAACGt                                                                                   <  2:1093206/143‑1 (MQ=37)                                                gTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGGCCATACCTAAAAAAGCCGGGGCTAATTCCCATAAGCGCTAACTTAAGGCACGTGGTATTAAGACTGATAGGATTTAACGta                                                                                  >  2:105004/1‑142 (MQ=38)                                                 tttACGGCTCTACCCTGGGGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                                                                 <  1:945736/143‑1 (MQ=255)                                                 ttgaCGCCTCTCCCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                                                                 <  2:811382/140‑1 (MQ=255)                                                  ttACGGCTCTACCCTGTTGATTTTGTTTTCTGCGTCAATCGCAGCACTGGTGCGGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGcc                                                                                <  1:663157/143‑1 (MQ=25)                                                   tACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                                                               <  1:1096250/143‑1 (MQ=255)                                                    aCGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGa                                                                              <  1:562066/143‑1 (MQ=255)                                                     cGGCGCGACCCTGGTGAGTGTGGTGGCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAt                                                                             <  2:1077275/143‑1 (MQ=255)                                                      ggCTCTACGCTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGAGAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg                                                                            <  2:1100068/143‑1 (MQ=255)                                                       gCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATGACGCCTGATATGATTTAACGTGCCGATGa                                                                           >  1:700553/1‑143 (MQ=255)                                                             cccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATAATTTAACATGACGATGAATTaat                                                                     >  1:307347/1‑141 (MQ=255)                                                             cccTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCTCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAct                                                                     <  1:550778/143‑1 (MQ=255)                                                              ccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActc                                                                    >  1:1121842/1‑143 (MQ=255)                                                              ccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGCTGTGGTATTACGCCTGATATGATTTGACGTGCCGATGAATTAccc                                                                    >  2:702903/1‑141 (MQ=255)                                                                   tGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATGAGCTTAGTCGCTAACTTAAGGGCTGTGAATATAGGCCGTAAATGATTTCAGTAGTCTATGAATTACTCTCACg                                                               >  1:264533/1‑143 (MQ=255)                                                                       tgtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATaa                                                           <  1:294191/143‑1 (MQ=255)                                                                          gCTGCCTGCCTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTg                                                        <  2:884563/143‑1 (MQ=255)                                                                           cTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTCACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAGTTACTCTCACGATAACTgg                                                       >  1:278702/1‑143 (MQ=255)                                                                            tGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                                                      <  1:134578/143‑1 (MQ=255)                                                                            tGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                                                      <  1:409674/143‑1 (MQ=255)                                                                              tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGCTAACTGGTCa                                                    >  1:1084175/1‑143 (MQ=255)                                                                              tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                                                    >  1:1089283/1‑143 (MQ=255)                                                                               cTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg                                                   <  1:777529/143‑1 (MQ=255)                                                                                tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    >  2:605937/1‑93 (MQ=255)                                                                                tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    <  1:605937/93‑1 (MQ=255)                                                                                tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGc                                                  >  1:363134/1‑143 (MQ=255)                                                                                    gcgctCGCGGGACTGGTGATGTAAGACCATACATAAAAGAGCCGGGGATAATTCCCATAAGCGCTAACCGAAGGTTTGTGGTATTACGGCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAtt                                              <  2:551286/139‑1 (MQ=17)                                                                                      aattacagcaCCAGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTACGGGTTGTGGTATTACGCCTGATATGAATAAACGTGCCGACGAATCACCCTCACGATAAACGGTTGGCACTTCt                                            >  2:588378/6‑143 (MQ=18)                                                                                       aTCGCAGCACTGGAGCTGTAAGACCATACATAAAAAAGCCGGGGATAACTCCCAAAAGCCCTAACTTAAGGGCTGTGGTATAAAGCCTGATAAGATTTAACGAACCGATGAATTACTAACACGATAACTGGACAGCaacacga                                           >  2:100206/1‑138 (MQ=255)                                                                                       aTCACAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAGGTATGACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg                                           <  1:935218/143‑1 (MQ=255)                                                                                         cGCAGCACTGGCGCTGTACGACCACACATAAAAAAGCCGGGGATTATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTCACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc                                         <  2:864117/143‑1 (MQ=17)                                                                                          gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGGGCGAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAGTTACTCTCACGATAACTGGTCAGCAATTCTGGcc                                        >  1:517463/1‑143 (MQ=255)                                                                                          gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGcc                                        <  2:343075/143‑1 (MQ=255)                                                                                          gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAGTCTGGcc                                        >  1:517243/1‑143 (MQ=255)                                                                                           cagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTGAGTGTCGTGGTATTACGCCTGATATGATTTAACGTGCCGATGCATTACTCTCACGGTAACTGGTCAGCAATTATGGcac                                       >  2:576626/1‑141 (MQ=18)                                                                                            agcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCa                                      >  1:1015401/1‑143 (MQ=255)                                                                                                   gTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGt                               >  2:869019/1‑143 (MQ=255)                                                                                                        gTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGcc                          >  1:932780/1‑143 (MQ=255)                                                                                                         tAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACTTGCCCATGAATTCCTCTCACGATCACTGGTCAGCAACTCTCGcccctcctgcaacgccc                         >  2:1128741/1‑129 (MQ=17)                                                                                                         gaaGACCAGACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGccc                         <  1:113266/142‑1 (MQ=255)                                                                                                            gACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGACGgaa                      >  1:196049/1‑143 (MQ=255)                                                                                                               catacataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaagaa                   <  1:164625/143‑1 (MQ=255)                                                                                                                agacataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAc                  <  2:489588/141‑1 (MQ=255)                                                                                                                 tacataAAAAGTCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTTGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                 <  2:722170/143‑1 (MQ=255)                                                                                                                 tacataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                 <  1:839279/143‑1 (MQ=255)                                                                                                                 tacataAAAAAGCCGGGGATAATGCCCATAAGCGCTAACTTAAGTGTTGTGGTAGTACGCCTGATATGATGGAACGGGCCGAGGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                 <  1:292547/143‑1 (MQ=14)                                                                                                                  acataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATGTAACGTGCCGATGAATTACTCACCCGATAACTGGCCAGCACTTCTGGCCCATATTGGTAAGCCCGAAGCACTg                >  2:897358/1‑143 (MQ=14)                                                                                                                    ataAAAAATCCGGGGACACTTCCCATAACCGCCAGCTCAAGGGTCGTGGTATTACGCCGGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa              <  1:47442/143‑1 (MQ=14)                                                                                                                    ataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa              <  1:1031359/143‑1 (MQ=255)                                                                                                                      aaaaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa            >  1:592421/1‑143 (MQ=255)                                                                                                                        aaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACt          >  1:893926/1‑143 (MQ=40)                                                                                                                        aaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGAGATGATTTAACGTGCCGATCAATTACTTTTTCGATAAATGGTCAACATTTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACt          >  1:1056888/1‑143 (MQ=14)                                                                                                                            gCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCACTTCCGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCgg      <  1:328921/143‑1 (MQ=25)                                                                                                                            gCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGCAGAACTGGacccttacg      >  1:150885/1‑135 (MQ=255)                                                                                                                             ccGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGc     >  1:922016/1‑143 (MQ=37)                                                                                                                              tggggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCa    >  2:791646/2‑143 (MQ=21)                                                                                                                               ggggATAATTCCCATGAGCGCGAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc   <  1:797891/143‑1 (MQ=21)                                                                                                                               ggggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTACGCCCGAAGAACTGGATACTTCGGCAc   >  1:767047/1‑143 (MQ=25)                                                                                                                                gggATAATTCCCATACGCGCTAATTTAAGGGTTGTGGTATTACGTCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACg  <  2:338237/143‑1 (MQ=255)                                                                                                                                            |                                                                                                                                   TGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACG  >  NC_000913/2514136‑2514405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.