Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,976,907 A→C E104A (GAG→GCG)  galR → galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,976,9070AC100.0% 183.2 / NA 56E104A (GAG→GCG) galRgalactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (29/27);  total (29/27)

GACCACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGAGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATCCTGCCTGG  >  NC_000913/2976767‑2977045
                                                                                                                                            |                                                                                                                                          
gACCACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTGGGTGCAATGGTGAAAGCGGTCGAGCAGGTGGCTTATCACACCGGTAGTAATTTACAGATTGGGGACGGGTACCACCACGAACAAAAAgcgc                                                                                                                                          >  1:804146/1‑143 (MQ=255)
  ccACTGAACCGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCGTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGt                                                                                                                                        <  2:430684/143‑1 (MQ=255)
   cACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGATTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTc                                                                                                                                       >  1:597175/1‑143 (MQ=255)
   cACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGACTTATCATACCTGTGATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTc                                                                                                                                       >  2:710958/1‑143 (MQ=255)
     cTGAAACGGTCGGTCTGGTCGTTGGTGCTGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAg                                                                                                                                     <  1:918312/143‑1 (MQ=255)
     cTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGCAATTTTTTATTGATTGGCAACGGTTACCACAACGACCACAAAGCGCGTCAg                                                                                                                                     >  1:198846/1‑143 (MQ=255)
           cggtcgtgCTGGGCGGGGGGGGTGTTTCCGAGCCGGTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCAtt                                                                                                                               <  2:90365/143‑1 (MQ=255)
           cggtcggtCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCTGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCAtt                                                                                                                               <  2:121640/143‑1 (MQ=255)
                  tcTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCCTTGAGCAAc                                                                                                                        >  1:840121/1‑143 (MQ=255)
                       tCGTTGGTGAGGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATc                                                                                                                   <  1:724337/143‑1 (MQ=255)
                       tCGTGGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTGATCACACCGGTAAGTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATc                                                                                                                   <  1:466462/143‑1 (MQ=255)
                         gTTGGTGATGTTTCCGATCCGTTTTTAGGTGCAATGGTGAAAGCGGTCGAACCGGTGGCTCATCACACCGGTAATTTTTTATTGATTGGCAACGGGTAACACAACGAACAAAAAGCGCGTCAAGCAAGTGAATAACTGCTCCg                                                                                                                 >  2:989257/1‑143 (MQ=255)
                         gTTGGGGATGTTTCCGATCCGTTTTGCGGTGCAATGGTGCAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCg                                                                                                                 <  2:899160/143‑1 (MQ=255)
                                 tGTTTCCGATGCGTTTTTTCTAGCATTGGTGAAAGCTGTCGAACAGGTTGCTTATCACACCGGTAATTTTTTATTGATTTTCAACGCGTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCt                                                                                                         <  2:185874/143‑1 (MQ=255)
                                 gtgttccgttccgTTTTTCGGTGCATTGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCt                                                                                                         <  2:1041950/140‑1 (MQ=255)
                                   tttCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCACCTGATCCGCCATCGCtgt                                                                                                       >  1:980360/1‑143 (MQ=255)
                                    ttCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCtgtg                                                                                                      <  1:417910/143‑1 (MQ=255)
                                        gATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCGTCGCTGtgctgc                                                                                                  >  1:53141/1‑143 (MQ=255)
                                          tCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGt                                                                                                >  1:414320/1‑143 (MQ=255)
                                               gtttCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGgtc                                                                                           <  1:609445/142‑1 (MQ=255)
                                                    ggTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCa                                                                                      <  2:611219/143‑1 (MQ=255)
                                                     gTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCAt                                                                                     >  1:180654/1‑143 (MQ=255)
                                                      tGCAATGGTGCAAGCGCTCTAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATg                                                                                    <  1:156710/143‑1 (MQ=255)
                                                      tGCAACGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATg                                                                                    <  1:1150769/143‑1 (MQ=255)
                                                        cAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCGTCGCTGTGCTGCGTGGGTCGCCCATGcc                                                                                  >  2:58018/1‑143 (MQ=255)
                                                            ggggAAAGCGGTCGAACAGGTGGCTGATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCaaaa                                                                              <  2:147279/140‑1 (MQ=255)
                                                              tGAAAGCGGTCGAACAGGTGGCTCATCACACGGGTAATTTTTTATTGATTGGCAACGGTTACGACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATAGCTGTGCTGCGTTGGTCGTGCAGGCCGAAATg                                                                            >  2:331234/1‑143 (MQ=255)
                                                                  aGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATcc                                                                        <  2:1079732/143‑1 (MQ=255)
                                                                           aCAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGGCGATGCCAAAATGATACCGGATGCTg                                                               >  1:505875/1‑143 (MQ=255)
                                                                             aGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGCTCCCGGATGCTggt                                                             >  2:781931/1‑141 (MQ=255)
                                                                               gtagtggtttgcacCGGGAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGGCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGAttt                                                           <  2:180654/132‑1 (MQ=255)
                                                                                         acacCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGGAACTGATCCGCCATCGCTGTGCTGGGTTGGTCGTCCATGCCAAAATGCTCCCGGATGCCGCTTTAGCCTCATTa                                                 >  2:541611/1‑143 (MQ=255)
                                                                                         acacCGGTAATTTTTTATTGAATGGCAACGGTTACCACACCGAACAAAAAGCGCGTCAGGCCATTGAGCCACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAACATGATCCCGGATGCTGATTTCGCCTCAtga                                                 >  1:472836/1‑141 (MQ=255)
                                                                                               gcaaTTTTGTATTGATTGGCAACGGGTACCACAACGAACAAAGAGCGCGTCAGGCCATTGAGCAACTGAGCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGaaa                                           <  1:32020/141‑1 (MQ=255)
                                                                                                tAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAAc                                          >  1:883428/1‑143 (MQ=255)
                                                                                                 aaTTTTTTATTGATGGGCAACGGTTACCACAACGACCCACCAGCATGCCAGTCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACa                                         <  1:859629/143‑1 (MQ=255)
                                                                                                 aaTTTTCTATGGATCGGCAACGGTTACCACAACGACCCATCCCCGCGTCAGGCCCTTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACa                                         <  1:859854/143‑1 (MQ=255)
                                                                                                  aTTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGCTTTAGCCTCATTAATGAAACaa                                        >  1:222803/1‑143 (MQ=255)
                                                                                                    tttttATTGATTGGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCCACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAGAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACaacg                                      >  2:471109/1‑141 (MQ=255)
                                                                                                          ttgattgGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCgg                                >  1:633184/1‑143 (MQ=255)
                                                                                                            gattgGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTa                              >  2:642626/1‑143 (MQ=255)
                                                                                                            gatggGCAACGCTCACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTa                              <  1:191208/143‑1 (MQ=255)
                                                                                                              ttgGCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGATGATTTAGCCTCATTAATGAAACAAATGCTCGGTATg                            >  2:745994/1‑143 (MQ=255)
                                                                                                               tcgCAACGGTCACCACAACGAACCAACAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATgg                           <  1:593515/141‑1 (MQ=255)
                                                                                                                 gCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTTATCCGCCATCGCTGTGCTGCGTTGGTCGTCCAGGCCAAAATGATCCCGGATGCTGATTTCGCCTCATTAATCAAACAAATGCCCGGTATGGTg                         >  2:363746/1‑143 (MQ=255)
                                                                                                                 gCAACGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATGCAGGATGCTGATTTAGCCGCATTCATGAAACAACTGCCCGGTATGGTg                         >  2:1089458/1‑143 (MQ=255)
                                                                                                                   aaCGGTTACCACAACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATCAATGAAACAAATGCCCGGTacgccgct                       >  1:223460/1‑136 (MQ=255)
                                                                                                                      cgTTACCACAACGAACAAAAAGCCCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTTCTGCTTTGCTCTTCCATGCCCAAATGTTCCCGGATGCTTATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGAt                    <  1:326432/142‑1 (MQ=255)
                                                                                                                          actagagcGAACAATTAGCGCGTCAGGGTATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTTGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAAc                <  2:36944/136‑1 (MQ=255)
                                                                                                                            cacaACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCg              >  2:409808/1‑143 (MQ=255)
                                                                                                                            cacaACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGATATGGTGCTGATCAAcag              >  1:65547/1‑141 (MQ=255)
                                                                                                                            cacaACGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGAGTTCGCCTCATTAATGAAACAAATGCCCAGAAAGGGTCTGATCAACCg              >  2:1018145/1‑143 (MQ=255)
                                                                                                                               aaCGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAACTGCCCGGTATGGTGCTGATCAACCCTAt           >  2:330515/1‑143 (MQ=255)
                                                                                                                                aCGAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATc          <  2:920129/143‑1 (MQ=255)
                                                                                                                                  gAACAAAAAGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATcct        >  1:1069369/1‑143 (MQ=255)
                                                                                                                                       aaaaGCGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATcctgcctg   <  2:1069369/143‑1 (MQ=255)
                                                                                                                                        aaaGCGCGTCAGGCCAGTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATCCTGCCTgg  <  1:561159/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                          
GACCACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGAGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATCCTGCCTGG  >  NC_000913/2976767‑2977045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑