Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 702,306 C→T R149H (CGT→CAT)  nagA ← N‑acetylglucosamine‑6‑phosphate deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913702,3060CT100.0% 233.1 / NA 76R149H (CGT→CAT) nagAN‑acetylglucosamine‑6‑phosphate deacetylase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (32/44);  total (32/44)

GTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATC  >  NC_000913/702167‑702442
                                                                                                                                           |                                                                                                                                        
gTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGca                                                                                                                                       <  1:333473/143‑1 (MQ=255)
     cGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGTCACTCGACCAGCGCGGCATCAGGCTTATGcacacac                                                                                                                                  >  1:526661/1‑140 (MQ=255)
     cGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACacaa                                                                                                                                  >  1:370147/1‑143 (MQ=255)
      ggCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTCTGCACcaact                                                                                                                                 >  1:432413/1‑141 (MQ=255)
        cAGACACCACGATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCACTTCCGGTGCCAGGGTCACGTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTc                                                                                                                               <  1:704289/143‑1 (MQ=255)
          gAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGCCACCTTGGTTATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCgg                                                                                                                             <  1:1062067/143‑1 (MQ=255)
           aaaCCACAATCCCGGCATTTGCCAGTTTGCTGATGACGTCCGCAGGAACCATTTCCGGTGCCAGGGTCACGTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGa                                                                                                                            <  1:137784/143‑1 (MQ=255)
               cacaATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACGACAATCGAATTac                                                                                                                        >  2:1014458/1‑142 (MQ=255)
                 cagtCCGGGCATTTGCCAGTTTGCTGATGACTTCCGGAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATgg                                                                                                                      <  2:771426/140‑1 (MQ=255)
                 caATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATgg                                                                                                                      >  1:508477/1‑143 (MQ=255)
                   gtCCCGGCACGTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGt                                                                                                                    <  2:499493/142‑1 (MQ=255)
                   ctccccccctttGCCAGTTTGCCTACGACTTCCGCAGGAACCCTTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGCAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGt                                                                                                                    <  2:1069583/134‑1 (MQ=255)
                    tCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAACATTCGGCTTATGGGTg                                                                                                                   >  1:40120/1‑143 (MQ=255)
                     cccGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGc                                                                                                                  <  1:580576/143‑1 (MQ=255)
                      ccGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGcc                                                                                                                 >  1:63754/1‑143 (MQ=255)
                          cATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGAGTCACGGTGCCtatg                                                                                                             >  2:561811/1‑140 (MQ=255)
                           atttgaagagttGGTGATAACTGCAGGAGGAACCGTTTCCGGTGCCAGGGTCAGTTTGGTAACGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCttttt                                                                                                            <  1:732856/133‑1 (MQ=255)
                                ccAGTTTGTTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGTGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTAcc                                                                                                       <  2:278143/143‑1 (MQ=255)
                                       gCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCa                                                                                                <  2:762047/143‑1 (MQ=255)
                                        cTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAg                                                                                               <  1:575960/143‑1 (MQ=255)
                                        cTGATGACGGCCGCAGGCACCCGTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTCTCACACAGGAAATCGACCAGCGCGGCATGAGGCTTATGCACAAAGTGCGGATTATGGGTGCCTTTTTTTACCAGATTCAg                                                                                               <  1:1129426/143‑1 (MQ=255)
                                         tgatgaCTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGc                                                                                              >  2:501912/1‑143 (MQ=255)
                                            tgaCTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATCATGGGTGCCTTTTTTTACCAGATTCAGCCAc                                                                                           >  2:1185954/1‑143 (MQ=255)
                                               cTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCAGACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGa                                                                                        <  1:991566/143‑1 (MQ=255)
                                                   cGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGACGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCGTTTTTTACCAGAtttcgcgaccaccctt                                                                                    >  2:604667/1‑129 (MQ=255)
                                                    gCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTc                                                                                   <  2:63754/143‑1 (MQ=255)
                                                     cAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAAGGACGTCGGCGTTTTCACACAGGAAATTGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTcc                                                                                  <  1:1104258/143‑1 (MQ=255)
                                                      aGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGCGTGCCTTTTTTTCCCAGATTCAGCCACGGACCtcgca                                                                                 >  2:41619/1‑139 (MQ=255)
                                                       ggAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAACATTCGGATTATGGGTGCCTTTTTTTACCAGCTTCAGCCACGGACCTTCCAg                                                                                >  2:300237/1‑143 (MQ=255)
                                                         aaCCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGAt                                                                              <  1:535717/143‑1 (MQ=255)
                                                          aCCATTTCCGGTGCCCGGGTCACTTTGGTACTGACGTCGGCGTTTTCACTCAAGAAATCTACCAGCTCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATg                                                                             <  1:12092/143‑1 (MQ=255)
                                                           ccATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATga                                                                            >  1:583709/1‑142 (MQ=255)
                                                                    gTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAAc                                                                   >  2:992630/1‑143 (MQ=255)
                                                                      gCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGc                                                                 <  2:160272/143‑1 (MQ=255)
                                                                         aGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTGCCAGATTCTTCCCCGGACTTCCCCGATGCATACCTAAccactg                                                              >  2:399047/1‑138 (MQ=255)
                                                                          gggTCAGGTGGGTAATGACGGCGGCGTCTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGa                                                             <  2:1016795/143‑1 (MQ=255)
                                                                           ggTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACACAATTCGGATTATGGGTGCCTTTTTTTACTAGATTCAGCCACGGACCTTCCAGATGCAGACCGAACGcgtcat                                                            >  2:634282/1‑138 (MQ=255)
                                                                           ggTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTAGGGGTGCCTTTTTTTACCAGATGCAGGCACGGGCCTTTCAGCTGCAGACCTAAAGCCTgct                                                            >  2:1066077/1‑141 (MQ=255)
                                                                            gTCACTTTGGTAGTGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGTATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGAtt                                                           <  2:136592/143‑1 (MQ=255)
                                                                             tCACGTCGGTAATGACGTCGGCGGTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTc                                                          <  1:866726/143‑1 (MQ=255)
                                                                                 tttGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATGAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCGGATGCTGCCCTATCGCCTGCTTCGGAt                                                      >  1:45908/1‑143 (MQ=255)
                                                                                    ggTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGAACTTCCAGATGCAGACCTAACGCGTGATTAGGATGtt                                                   >  1:292042/1‑143 (MQ=255)
                                                                                        aTGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGc                                               <  1:562855/143‑1 (MQ=255)
                                                                                        aTGACGTCGGCGTTTTCACACAGGAAAGCGACCAGCGCGGCATCAGGCTTATCCACAAAATTAGGTTTATTAGTGTCTGTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGc                                               <  2:840574/143‑1 (MQ=255)
                                                                                         ttaCGTCGGCTTTTTCACACAGTAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCACATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTAcc                                              <  2:831525/141‑1 (MQ=255)
                                                                                         tGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGcc                                              >  1:354714/1‑143 (MQ=255)
                                                                                          catctttgctgttgcacacgGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCa                                             <  1:912326/129‑1 (MQ=255)
                                                                                           aCGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAg                                            <  1:992630/143‑1 (MQ=255)
                                                                                           aCGTCGGCGTTTTCACACAGGAAAGCGACTAGCGTGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCATTTTTTTACCAGAGTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAg                                            <  2:1008808/143‑1 (MQ=255)
                                                                                             gTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAACATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCATGt                                          >  1:426411/1‑143 (MQ=255)
                                                                                             gTCGGCGTCTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGt                                          <  2:358968/143‑1 (MQ=255)
                                                                                                  cgattccacacaGTCAGTCGACCAGCTCGGCTTCATGCTTATGCACAACATTCGGATTATGGGTGCCTTTTTTTTCCAGCTTCAGCCACGGACCTTCCAGATGCCGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTcg                                     <  2:159478/137‑1 (MQ=255)
                                                                                                  cGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCACATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTcg                                     <  2:530241/143‑1 (MQ=255)
                                                                                                  cGTTTTCACACAGGAAAGCGACCAGCGCGGCATCAGGCTTATGCACAAAAATCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTcg                                     >  2:911422/1‑143 (MQ=255)
                                                                                                        cacacaGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATa                               <  1:501912/143‑1 (MQ=255)
                                                                                                         ccacaGGAAATCGACCAGCGCGGCATGAGGCTTATGCACAAAATTCGGACTATGGCGGCCTTTTTTTACCAGATTCAGCGACGGACCTTCCAGATGCAGCCCTTACGCCTGCTTCGGACGTTTTGCCACGTACCCgcgcctca                              >  2:1131373/2‑139 (MQ=255)
                                                                                                         acacaGGAAATCGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATaa                              <  1:317344/143‑1 (MQ=255)
                                                                                                             aGGAAATAGACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGGTTTGCCAGGTAGTCGCGCATAAcgcg                          >  2:1059467/1‑143 (MQ=255)
                                                                                                              ggATATCTACCCGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACgcgc                         <  1:1110469/143‑1 (MQ=255)
                                                                                                                    cGACCAGCGCGGCATCAGGCTTATGCACAAAAGTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGccc                   <  2:370147/143‑1 (MQ=255)
                                                                                                                     gACCAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCt                  >  1:1038603/1‑143 (MQ=255)
                                                                                                                       ccAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGTTGTTTTGCCTGGTCCTCGCGCATAACGCGCACGCCCTGt                >  1:658669/1‑143 (MQ=255)
                                                                                                                       ccAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGt                >  2:48721/1‑143 (MQ=255)
                                                                                                                        cAGCGCGGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGtt               <  1:1106486/143‑1 (MQ=255)
                                                                                                                         aGCGCGGCATCAGGCTTATGCACAACCTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGttt              <  2:662136/143‑1 (MQ=255)
                                                                                                                           cgcgGCATCAGGCTTATGCACAACATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGCTGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtca            <  2:508477/143‑1 (MQ=255)
                                                                                                                           cgcgGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACAAAGAGATATTAACGGTTGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtca            >  1:545882/1‑143 (MQ=255)
                                                                                                                            gcgGCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtcat           <  1:1142970/143‑1 (MQ=255)
                                                                                                                             cgGCAACAAACTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTACCGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTtcatc          <  2:763113/143‑1 (MQ=255)
                                                                                                                               gCATCGGGCTTATGCACAAGCTGCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAGCGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATATCGCGCACGCCCTGTTTCATCAg        <  2:92577/143‑1 (MQ=255)
                                                                                                                               gCATCAGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCGCGCCCTGTTTCATCAg        >  1:506232/1‑143 (MQ=255)
                                                                                                                               gCATCAGGCTTATGCACAAAATTCGGACTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAg        <  1:48721/143‑1 (MQ=255)
                                                                                                                                cacctggCTTATGCACAACATTCGGATTATGCGTGCTCTCTTTTACCAGACTCCGCCACGGACCTTCCACATACAGACCTACCGCCTGATTCGGATGTTTTGCCAGGTACTCGTGCATAACGCGCACGCCCTGTTTCATCAGc       <  2:90001/138‑1 (MQ=255)
                                                                                                                                    aGGCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGCCCTTCCAGATGCAGACCTAACGCCTGCTTCGGCTGTTTTGCTAGGTCCTCGCGCCTAACGCGCACGCCCTCTTTCCTCAGCTcct   >  2:852249/1‑141 (MQ=255)
                                                                                                                                    aGGCTTATGCACAAAATTCAGATTATCCGAGCCTTGGTTTACCAGATTCAGCCACGGACCTTCAAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCTCATACCGCTCACGCCCTGTTTCATCAGCTCAt   >  2:256494/1‑143 (MQ=255)
                                                                                                                                     ggCTTATGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATc  <  1:449459/143‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                        
GTGACCGGCAGAAACCACAATCCCGGCATTTGCCAGTTTGCTGATGACTTCCGCAGGAACCATTTCCGGTGCCAGGGTCACTTTGGTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATC  >  NC_000913/702167‑702442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: