New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =54 (1.090)16 (0.360) 16/250 2.1 27.9% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 35 (0.800)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGC  >  NC_000913/1207649‑1207931
                                                                                                                                             |                                                                                                                                             
tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                              >  2:708495‑M1/142‑143 (MQ=255)
 ggtggCGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTg                                                                                                                                             <  2:604997/143‑1 (MQ=255)
     agttcagcgcgttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatcctccttgtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                                                                         >  1:130618‑M1/137‑143 (MQ=255)
     agttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                                                                         <  2:796192‑M1/7‑1 (MQ=255)
      gttcagcgcaatacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                                                                        >  2:440325‑M1/136‑143 (MQ=255)
       ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcatacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                       <  2:373375‑M1/9‑1 (MQ=255)
       ttcagcgcattacgttgtagatctgtgtcctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaatgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                       >  2:495825‑M1/135‑143 (MQ=255)
       gtcATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                       <  1:369245/141‑1 (MQ=255)
       ggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                       >  2:165915/1‑143 (MQ=255)
        gCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTggg                                                                                                                                      >  2:332134/1‑143 (MQ=255)
          aTCCGGTGCCAGCCTGGCGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGCTGGCACTGTGCAAACTGCTCTCGCACACCGTGGTTTgggcg                                                                                                                                    >  1:203497/1‑141 (MQ=17)
            ccGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGaa                                                                                                                                  <  2:541540/143‑1 (MQ=255)
             gcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttctttcttctttttcataatcgCTGGTTTGGGAGAAg                                                                                                                                 <  2:45733‑M1/15‑1 (MQ=255)
              ggTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAgg                                                                                                                                <  2:270191/143‑1 (MQ=255)
              ggTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAgg                                                                                                                                <  2:573012/143‑1 (MQ=255)
                ttacgttgtagagcggggttctggtcatttgttgatacgagaacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcagaaacgTTGGTTTGGGAGAAGGAg                                                                                                                              >  1:304028‑M1/126‑143 (MQ=255)
                cgCCAGCCTGGCGACGGCGCGCCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAg                                                                                                                              <  2:4189/142‑1 (MQ=255)
                    aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTCCGCGCGCTGCTGTTACGCCGCCCGCAAGCGGTGTATGAAATCTGATTTTGCTTCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaa                                                                                                                          <  2:199463/143‑1 (MQ=12)
                            gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                  <  1:98868/143‑1 (MQ=255)
                                gggCGGCACGACCAGTTACTGACCGCACTTCGAGCGCTGCTGTTAAGCCGCAAGCATCCGTTTGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAAGGAGCAACGCTCAATgcagc                                                                                                              >  1:451121/1‑143 (MQ=18)
                                     tcgtcatttgtcgatacgagtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                         >  1:250687‑M1/105‑143 (MQ=255)
                                         gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACCCAATGCAGCAACGGCTAc                                                                                                     >  1:222828/1‑143 (MQ=255)
                                           tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                    <  2:282788‑M1/28‑1 (MQ=255)
                                           tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                    >  1:282788‑M1/99‑126 (MQ=255)
                                             aGTTATTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACagga                                                                                                 >  1:715810/1‑140 (MQ=255)
                                             aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCGAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCCCGGAACCCCTGGTTCGGGAGAAGGAGCAAAACTCAATGCggcgacggcgaccgca                                                                                                 >  2:379986/1‑139 (MQ=21)
                                                tacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                              <  2:365806/143‑1 (MQ=255)
                                                  cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTACATTAGGGCg                                                                                            >  1:281179/1‑143 (MQ=255)
                                                  cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                <  2:581424/123‑1 (MQ=255)
                                                  cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                >  1:581424/1‑123 (MQ=255)
                                                  agtacCGCACTGCACGCGCTCCGGTTAAGGCGAAAGACTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTATCTAAAACCTCGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                            <  2:528767/141‑1 (MQ=255)
                                                   ttacCGCACTTCGCGCGCTGCTGATAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGACACAGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAGGGAGCAGAACTCAAAGAAGCAACGGCTACATAAGAACGc                                                                                           >  1:37676/1‑143 (MQ=18)
                                                       cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                       >  1:377277/1‑95 (MQ=255)
                                                       cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                       >  1:826281/1‑95 (MQ=255)
                                                       cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                       <  2:377277/95‑1 (MQ=255)
                                                       cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                       <  2:826281/95‑1 (MQ=255)
                                                          acgtCGCGCGCTGCTGTTGAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                    <  2:468683/140‑1 (MQ=255)
                                                           catagccaataagcatgttaaatccccctggtaaaagcagcaatgatgccatttgcttgttatttcttccttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                   >  1:417139‑M1/83‑143 (MQ=255)
                                                               gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                               <  2:727275/143‑1 (MQ=255)
                                                                cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                              <  2:739751/143‑1 (MQ=255)
                                                                     tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAAAGGCTCGCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTCCATTAGGACGCACCGGGTTCATAGCtaga                                                                         >  2:14872/1‑141 (MQ=255)
                                                                       ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCGAATCGTATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                       <  2:158022/143‑1 (MQ=255)
                                                                        tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                      <  1:811410/143‑1 (MQ=255)
                                                                          ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGCAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                    >  2:106492/1‑143 (MQ=255)
                                                                          ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCGCGTAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                    >  2:283061/1‑143 (MQ=255)
                                                                            ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                  <  1:1714‑M1/78‑1 (MQ=255)
                                                                             aGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                 <  2:103129/143‑1 (MQ=255)
                                                                                     gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                         <  2:515883/143‑1 (MQ=255)
                                                                                            tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAACGGTAATGCTAGGTGGTATTGa                                                  >  1:373343/1‑143 (MQ=255)
                                                                                             aagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                 >  2:648914‑M1/49‑143 (MQ=255)
                                                                                              tgccGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                                                <  2:96812/140‑1 (MQ=255)
                                                                                                gCGATATCAAATCGGATGGGGCTGTGCAAACGCCTCTCGAAAGCCTTGGTTGGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCaa                                              <  1:398201/143‑1 (MQ=255)
                                                                                                caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGAGCaa                                              <  2:342555‑M1/98‑1 (MQ=255)
                                                                                                 aggaatgaggccatttgcttggtatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATCCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                             >  1:656182‑M1/45‑143 (MQ=255)
                                                                                                     atCAAGTCGGATGGCACTGGGCAAACGGCTCTCGCAACCCCCGCTTTGGGATAGGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                         <  1:379986/143‑1 (MQ=255)
                                                                                                       cAAATCGGATGGCACTGTGCAAACGGCTCACGAGAACCTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTGTTGAGCGATCGGTaa                                       >  2:636954/1‑143 (MQ=255)
                                                                                                        aaaTCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTGTACCGGTTATGATCGGTGGTAGTGAGCAATCAGTAAt                                      >  1:524699/1‑143 (MQ=255)
                                                                                                             ttgtGGCACGGTGCGACCGGCTCTCGTCATGCGGGGTGCGGGAGAAGGAGCAAAACTCTATGCAGCAACGGCTACATTAGGACGCACCGTTTTCATAGCCTCACCGGTTATGATTGGCTGTATTGAGCAATCAGTAATCATTc                                 <  1:378100/140‑1 (MQ=255)
                                                                                                             atttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                 <  1:108089‑M1/111‑1 (MQ=255)
                                                                                                                  cttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                            >  2:1714‑M1/28‑143 (MQ=255)
                                                                                                                    tgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                          >  2:108089‑M1/26‑143 (MQ=255)
                                                                                                                    aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                          >  2:642592/1‑143 (MQ=255)
                                                                                                                        tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                      >  1:598573/1‑143 (MQ=255)
                                                                                                                         tttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                     <  2:10558‑M1/123‑1 (MQ=255)
                                                                                                                           aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCACACAGTAATCATTCAGTGCGGGTGGacg                   >  1:504036/1‑141 (MQ=255)
                                                                                                                              ttattttcgtaaacgTTGTTTTTGGAGAAGGAGCAAAACTCAATGCAGAAACGGCTATATTAGGACGCACCGGTTTTATAGGTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                >  1:385286‑M1/16‑143 (MQ=255)
                                                                                                                                gCTCTCGAAAACCGTGGTTTGGGAGAAGCAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc              <  1:720111/143‑1 (MQ=255)
                                                                                                                                   ttcataaacgTGGGTTTGGGAGAAGGAGCAAAACTCAATGCATCAACGGTTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATCGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa           >  1:83089‑M1/11‑143 (MQ=255)
                                                                                                                                   ctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa           >  2:34555/1‑143 (MQ=255)
                                                                                                                                    tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGCGCAATCAGTAATCATTCAGTGGGGGTGAAATGCCGCaaaa          >  1:777286/1‑143 (MQ=255)
                                                                                                                                    tcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGCACGAACCGGTTCCATAGCTATACCGGTTATGACTGGGGGTATTGAGCAACCAATAATCATTCATTGGGGGTGGAATGGCGCaaag          >  1:303610/1‑142 (MQ=255)
                                                                                                                                      gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                >  2:344727/1‑55 (MQ=255)
                                                                                                                                      gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                <  1:344727/55‑1 (MQ=255)
                                                                                                                                      gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCACAAGc        >  1:563019/1‑143 (MQ=255)
                                                                                                                                          acgTTGGTTTGGGAGAATGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt    >  2:645498‑M1/4‑143 (MQ=255)
                                                                                                                                            cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCCGTGGGTGGCGAACGCCGCAACAGACTCTGc  >  2:536985/1‑143 (MQ=255)
                                                                                                                                            cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc  >  2:792483/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                             
TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGC  >  NC_000913/1207649‑1207931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.