| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 31 (0.630) | 27/282 | 1.0 | 96.9% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA > NC_000913/4001501‑4001785 | cAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat > 2:646465/1‑143 (MQ=255) aTCTTGTCGCACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctt < 1:66873‑M1/143‑13 (MQ=255) cTTGTCGAACCGGACGATGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct < 2:339833‑M1/143‑15 (MQ=255) tGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt > 2:838761‑M1/1‑127 (MQ=255) gTCGAACCGGACGACGACGAGCGACGGCGCGTACAAGCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:551585‑M1/143‑18 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACCGCCTTCATctcctttttcttctttga > 2:468939‑M1/1‑125 (MQ=255) cGACCCGGACGACGCCGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTCGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:80540‑M1/143‑20 (MQ=255) cGACCCGGACGACGACGAGCGACGGCGCGAAAAATTAGTTGTTGGGCAGAGCCTGGCAACGCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:178422‑M1/143‑20 (MQ=255) cTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccgtcttcttctttgaagatgcggaagatcacgccggta > 2:719153‑M1/1‑102 (MQ=255) gtccaatCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGCACCTCGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcca < 1:89147‑M1/140‑48 (MQ=255) gTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcca < 2:798006‑M1/143‑48 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:639337‑M1/143‑53 (MQ=255) cTGACCTTGGCCAGGGCCTGGCGACCCGCCGGGAGCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggc < 1:790390‑M1/143‑55 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcat > 2:269135‑M1/1‑87 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac < 2:137034‑M1/143‑61 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcatcttggtagaggcggaagatcacgccggtaactccactgtggcagttaccatc > 2:853473‑M1/1‑79 (MQ=255) gCCGGGCAGCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 1:853826‑M1/143‑70 (MQ=255) ggAAGCCAGCGAAGCAGCGGCACGTTTCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 1:646465‑M1/143‑92 (MQ=255) ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcttttaccatccgtgatggtcgtctgtttactctgcgt < 2:559090‑M1/143‑92 (MQ=255) ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 2:665915‑M1/143‑92 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttatcattactttaagatgcggatgaacacgccggtaactccactgtggcatttaccatccgtgatggtcgcctgtttactctgcgtgagcgtga > 1:839879‑M1/1‑44 (MQ=255) cGACGCCTCGGCCCGTTTCTTTGAAGACGACCACGGCCTGCATctccttcttcttcttcgacgacgcggaagatcccgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:197674‑M1/143‑101 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 2:465697‑M1/143‑105 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt > 2:526022‑M1/1‑33 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt < 1:317250‑M1/143‑111 (MQ=255) aCGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtggtggtcgtctgtttactctgcgtgagcgtgaactgcccgctttt > 2:813489‑M1/1‑31 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg > 2:111910‑M1/1‑29 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgt < 1:269135‑M1/143‑120 (MQ=255) tttGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGACCACGCCGGTCACGCCACGGTGGCATTTCCCATCTGGGATGGCCGTCAGTTTCCTCTGCGTGCGGCAGCAATGCCCGCTGTTCCGCTGt > 1:770660/1‑143 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagaccacgccggtaactccactgtggcatttaccatccgtgatggtggtctgtttactctgagtgagcgtgaactgaccgcatttcgtcagtctcgta > 1:503433‑M1/1‑18 (MQ=255) acgacgacgGCCTGCATctccttcttcctctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgttatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 2:128605‑M1/143‑127 (MQ=255) acgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc < 2:189609‑M1/143‑133 (MQ=255) tctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatgcgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgcagccag > 1:391986‑M1/1‑1 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA > NC_000913/4001501‑4001785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |