New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4296249	NA (NA)	7 (0.150)	5/268	6.2	59.6%	noncoding (416/602 nt)	RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites	RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites
	?	NC_000913	= 4296279	5 (0.100)					noncoding (446/602 nt)	RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites	RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites
Rejected: Coverage evenness skew score above cutoff.

GCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC  >  NC_000913/4296260‑4296416                    |                                                                                                                                          gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGCTAAGGCGTGTACGCCGCATCCGACATCAATGCCt                >  2:389504/1‑143 (MQ=17)   gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa              >  2:189509/1‑143 (MQ=32)   gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAAGCCTACGCAAGACAGCGCAATAGACTGCTTTAGCGTGATTTTGTAGGTCGGAGAAGGCGTTTACGCCACATCCTTCATCAATGACTGa              >  1:581575/1‑143 (MQ=11)          ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACg       >  2:337228/1‑143 (MQ=32)               tCCGACATCAACGCCTGATGAGACGATTAACGCGGCTTATCAGGCCTACGCCAGACCGCGCACTAGCCTGACTTAGCGAAATTTTGAATGTCGGATAAGGCGTTTACGCCGCATCCTACATCAATGCGTGATTCgcagatatc  >  1:28680/1‑135 (MQ=11)                    |                                                                                                                                          GCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGC  >  NC_000913/4296260‑4296416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.