New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	381898 =	NA (NA)	3 (0.060)	3/272	7.8	NA	coding (225/906 nt)	insD1	IS2 transposase TnpB
	?	NC_000913	381933 =	NA (NA)					coding (260/906 nt)	insD1	IS2 transposase TnpB
Rejected: Coverage evenness skew score above cutoff.

TTCTTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/382045‑381898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgaTCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTT  >  NC_000913/381933‑382074                                                                                                                                                                                                                                                                                                    TTCTTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTC                                                                                                                                                     >  1:473054/1‑143  gCTTTCGCGCCCACTCTGCCCGTATCGGGCCGCTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCT                                                                                                                                                    <  2:43646/142‑1  TCTTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCT                                                                                                                                                    >  1:592971/1‑143    TTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTACACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGC                                                                                                                                                  >  1:473233/1‑143    TTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCCACCAGTGGGGCCTGTCTGC                                                                                                                                                  >  1:119841/1‑143    TTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGCACAGCAGGTTTTCACTACAGAAACAGCGCATTCTGGCGCATGATACGGTAAACACGTTTGGCAGTGATCGCAGGCATCCCATCAAGATCTGCCTGTCTGC                                                                                                                                                  >  2:838064/1‑143     tcccCGGCCACTCTACCTTTATGTGCCCGTTTCGAGGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAGCACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCG                                                                                                                                                 <  2:628934/139‑1     tacagGGCCACTCAGCCGGTAGGTGCCCGTTTCGAGGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCG                                                                                                                                                 <  1:347549/138‑1     TTCGCGGCCACCCTACCTGTATCTGCGCGTTGCGATGGAGGTAGAGCAGGTTTTCGCGCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCG                                                                                                                                                 <  2:814798/143‑1     TTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCG                                                                                                                                                 >  2:644079/1‑143     TTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCG                                                                                                                                                 >  1:846454/1‑143     TTCACGCCCCCTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCG                                                                                                                                                 <  1:884373/143‑1      TCACGGCCCCTCGGCCTGTAGGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCGA                                                                                                                                                <  1:603746/143‑1      TCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGACCGTCCAGCAGGTTTTCGTTCAAGCAACCGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCCTTGATCGCAGGCATCCCATCAAGTTCTGCCTGTCTGCGc                                                                                                                                                >  1:172122/1‑142        ACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACCCGGTTCGCATCGATCGCCCGGATACCATCAAGTTCCGCCTGCCTGCGcag                                                                                                                                              >  1:902572/1‑140            CCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCaaag                                                                                                                                              <  1:636584/139‑5            CCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCaaag                                                                                                                                              >  2:636584/1‑135                TCTGCCCGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCttcgcagacagg                                                                                                                                      <  1:173109/143‑13                                                                                                            CATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGATGTACCGCCATCGAAACGGGCACATACAGGCCGAGTGG                                          >  1:616001/1‑143                                                                                                              TTGATCGCAGACATACCATCAAGTTCTGCCTGTCTGCGATCAATGCCAAACGTGTTTACCGGCTCATGCGCCAGAATGCGCTGTTGCTTGGACGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCC                                        >  1:513604/1‑143                                                                                                                                   tcgatcataTGTCTGCGCGCAAGGACAACTGTGTTTCCCGGATCAGGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGA                   <  2:635709/134‑1                                                                                                                                            tgcgTGCGATCAATGCTAATCGTGTTTATCGGAGCAGGCGTCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCT          <  2:93085/139‑1                                                                                                                                            tgccggtGATCAGTTCCAAGCGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCT          <  2:149760/136‑1                                                                                                                                               ctaCGATGAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGCGAAAGAAAGCAAGCAGCGAAGGCGGTCTGAC       >  2:693044/4‑143                                                                                                                                               aTGCGATGAGTGCCGAGCGTGGTTACCGGATCAGGCGGCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTGCCGCGATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC       <  2:894718/142‑1                                                                                                                                               CTGCGTTCAATGGCAATCGTGTGTACCTGATCATGCGCCAGAATGCGATGTTGCGTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC       <  2:315495/143‑1                                                                                                                                               CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATTGTGCTCTGgc       >  1:626640/1‑141                                                                                                                                               CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC       >  1:90231/1‑143                                                                                                                                               CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGCGAAAGAAAGCAATCAGCGATGGTGCTCTGAC       >  1:189679/1‑143                                                                                                                                               CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGGGGCCGGGAAAGAAAGCAATCAGCGAAGGAGCACTGAC       >  2:282556/1‑143                                                                                                                                               CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTCGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCACCGTGGCCCTGAAAGAAAGCCACCCGCGCTGGTGCTCTGAC       >  2:163586/1‑143                                                                                                                                               CTGCGATCAATGCCAAACGTATTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGCGAAAGAAAGCACTCAGCGATGGTGCTCTGAC       >  2:602742/1‑143                                                                                                                                               CTGCGAGCACTGCCAGACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCGTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC       <  2:601945/143‑1                                                                                                                                               CTGCGAGCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGAC       <  1:464146/143‑1                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGGGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACG      >  1:252287/1‑143                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGGAGAGTGGACGTGAAAGAAAGCAATCAGCGATGGTGCGCTGACG      >  2:539837/1‑143                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGGTGGTGCTCTGACG      >  1:316166/1‑143                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACG      <  2:613987/143‑1                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACG      <  1:615997/143‑1                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACG      >  1:254239/1‑143                                                                                                                                                TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCAATGagactctgccg      >  2:28066/1‑132                                                                                                                                                  CGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGG    <  1:695044/143‑1                                                                                                                                                   GATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGCAAGCAATCCGCGGTGGTGCTCTGACGGGT   >  1:721079/1‑143                                                                                                                                                   GATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGAGGAAAAGACAGCGAGTAGGCAGCGATGGTGCTCTGGCGGGT   >  1:701704/1‑143                                                                                                                                                    ATCAATGCCAAACGTGTTTACGGGATCATGCGCCAGAAAGCGCTGTTGCTTGAGCGAAAACCTGCTGTACGGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTGTGACGGGTg  >  1:132313/1‑142                                                                                                                                                    ATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAACACCTGCTGTACCGCCATCGAAACGGGCACATACAGGAAGAGGGGCCGTGAAAGGAAGCAATCCGCGAAGGTGCGCTGACGGGgt  >  2:41143/1‑141                                                                                                                                                                                                                                                                                                    TTCTTTCACGGCCACTCTGCCTGTATGTGCCCGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/382045‑381898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgaTCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTT  >  NC_000913/381933‑382074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.