| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,909,311 | Δ774 bp | [pstA]–[pstC] | [pstA], [pstC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3909311 | 3910084 | 774 | 38 [0] | [0] 37 | [pstA]–[pstC] | [pstA], [pstC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3909310 | 0 (0.000) | 37 (0.750) | 30/270 | 0.6 | 100% | coding (129/891 nt) | pstA | phosphate ABC transporter permease |
| ? | NC_000913 | 3910085 = | 0 (0.000) | coding (313/960 nt) | pstC | phosphate ABC transporter permease | |||||
ACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3909165‑3909310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGC > NC_000913/3910085‑3910208 ACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATCAAAATCCAGATCAGC > 2:28305/1‑143 AAATTGCCAGCCCGCTACCCGCCAGAGCGTTCGCCGTACCGCCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG < 2:523432/143‑1 tCGCTACCCGCCGGGGCGTTCGCCAGACCTCCACCCTCCGTATGGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCA < 2:18522/142‑1 TACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAAGCCAGATCAGCCAGGCGCAAGCTCAGTCg > 1:709390/1‑142 GCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAAC > 1:136225/1‑143 CCAGGGCGTTCGCCAGCCCACCACCTTCCGTATCGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACA < 2:571108/143‑1 AGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTAGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGC > 1:177989/1‑143 CGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGA < 1:749181/143‑1 CAGCCCACCATCCTCCGTATTGGGCGGCGGCGTCACGGCAGTGAACAGCGCCAGCGACCTACCGTCGATACCGCGAGTGATCGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGACGATACCGAA < 2:448651/143‑1 CAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGG > 2:62032/1‑133 CAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGG < 1:62032/133‑1 cagCACCGCCTTCCGTATGGGGCGGCGCCGCCACTTCAGTGAACAGCGCCAGCGACATCCCGTGGATACCGCGAGTGATGGTGGACATTAAAATCCATATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGACAC < 1:366892/140‑1 CTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGA > 1:536161/1‑143 gagTGGGCGGCGACGGAAGTTCAGTGAACGGCGCCAGCGACATACCGTCGACACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGA < 1:878495/140‑1 TATTGCGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATTGTGTACATTATAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGA < 1:447853/143‑1 CGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAG > 1:297526/1‑143 GCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCG < 1:721482/143‑1 catttggggggACAGCGCCCGCGACATACCGGCGATACCGCGAGTGATGGTGGACAGTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAA < 2:467026/132‑1 TCAGTGGACTGCGCCAGAGAGATAGGGTCGATACCGAGAGTGATTGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAA < 2:318403/143‑1 GTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATGAGCAGCGCGACAAACGAAGTC > 2:786944/1‑143 AACAGCGCCAGCGACATACGGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACC < 1:495887/143‑1 AACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAACTCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGCCGGCGCTCCGCAGCGCGAacaccgcaatcacc > 2:477952/1‑129 gcaCGCCAGCGCCTTAGCGTCGCTACCGGGGGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGGTCAGTCAGGAACAGGGCTATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAA < 2:762033/140‑1 GCGCCAGCGACAGACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACG < 2:34100/143‑1 aAGCGACATACCGTCGATACAGCGAGGGATGGTGGACAGTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACC < 1:810648/142‑1 CAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACC > 1:831780/1‑143 CGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACGGGGACGGCGATCAGCGGCGAGACAAAAGAAGACACCAACGTACGGTA > 2:366751/1‑143 ATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACCGGTCGGTACCGAAACTCACCGGGACGACGATCAGCAGAGGGCTCAACGACGTCACCAACGTACCGTAGAgc > 1:563231/1‑141 gACCGTCGAGACCGCGAGTGATGGTGGACAAGAAAATCGAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCG < 1:294649/142‑1 TCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGAGCGGCACC > 1:542569/1‑143 ATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGC > 1:534311/1‑143 ATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAACAGCGCGACAAACGAAGTCACCAACGTACGCTAGCTCGGCACCAGC > 2:416693/1‑143 agggctgttgaACATTAAAGGCCAGAGCAGCCAGGCGCAAGCTCAGTCAGGATCAGGGCGATACCGAAACTCGCCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTA < 1:698106/132‑1 gaGATGGTCGACACTAAAAGCCCGGCAGGCCAGGCGCAAGCGGAGTCAGGAACAGGGCGAGACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAG < 2:135688/141‑1 GTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCG > 2:719445/1‑143 GTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGACAAACGCAGTCACCAACGTACCGTAGCTCGGCACCAGCGCCCCGGAGATATCG > 2:719451/1‑143 atcatgacCCACATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT < 1:159888/135‑1 ATTAAACTCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAGCTCACCGAGCAGGCTGTGTTCAGCGCGAGAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT < 1:903679/143‑1 TAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGACACCAGCGCCCCGTAGCTATCGTGCGGCGC > 1:587969/1‑143 ACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3909165‑3909310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGC > NC_000913/3910085‑3910208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |