| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 41 (0.800) | 34/284 | 0.5 | 91.1% | intergenic (+9/‑768) | crl/crl | pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers |
| ? | NC_000913 | = 700605 | 4 (0.080) | coding (990/1221 nt) | nagC | N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor | |||||
Only 100 of 105 total aligned reads displayed.
CTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTAGCCCTGCT > NC_000913/700464‑700747 | cTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGg > 1:266590‑M2/1‑142 (MQ=255) ccggcggtgcttttgccgttacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGAt < 1:783775‑M2/11‑1 (MQ=255) aGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggta < 1:562314‑M2/143‑5 (MQ=255) tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagcccctggagcacctcaaaaacaccatcatacactaaatcagtcagttgacagcatcaccAATAAGTTGATAGCAATg > 1:735205‑M2/126‑143 (MQ=255) tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATg > 1:23058‑M2/126‑143 (MQ=255) gcttgggcggcgacgcacaaccccgtgagtagctggacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATgg < 1:348657‑M2/19‑1 (MQ=255) cttctgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGc < 1:23559‑M2/20‑1 (MQ=255) ccGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaac > 1:461549‑M2/1‑128 (MQ=255) cGGCAGATTAGTGCGAAACGCCTTTAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGAGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGCTGggaaaagaccacaatt < 2:307461‑M2/143‑17 (MQ=255) cGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGGGATTTCACCGGCGATAACAATTTTTTGCGGAGTAAATAAGATGggtaatgagtagaact < 1:142243‑M2/143‑17 (MQ=255) ccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaaccgaagccactggagcccctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGt > 1:280580‑M2/118‑143 (MQ=255) cgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtacgttggcagcatcacaAATAAGTTGATAGCAATGGCGATGGtt > 1:479921‑M2/117‑143 (MQ=255) cgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGgtg > 2:856008‑M2/117‑142 (MQ=255) cgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttgcaggtaccaccAATAAGTTGATAGCAATGGCGATGGtt > 1:854313‑M2/117‑143 (MQ=255) gtgtgaacctcgctcagcgcctgggtaTTAATGCAGCTTTCAATAGCAGGGAACAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagt > 2:533369‑M2/14‑117 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagatggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAg > 1:645594‑M2/109‑143 (MQ=255) tGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATACCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtg < 2:726372‑M2/143‑28 (MQ=255) caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggcgcacctcaaaaacacgctcatacaccaaatccgtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGAt > 2:435302‑M2/107‑143 (MQ=255) caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGAt < 1:329576‑M2/37‑1 (MQ=255) cGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagggtt < 2:87234‑M2/143‑30 (MQ=255) aCGCCTTCATCGCCTGTGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttat > 1:710665‑M2/1‑110 (MQ=255) gtcagtagctgaacaggagggacagctgaaataaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgacaac > 2:793365‑M2/101‑143 (MQ=255) acagtagctgaacaggaggggcagctgctagacacagaagccactggagcacctcaacaacaccatcatacactaaatcggtaagttggcagcatcaccAATAAGTTGATAGCATTGGCGATTGTTTTACCCAGATGAcgacc < 2:714828‑M2/44‑1 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGATTTACCCAGATGAcgaccg > 2:304253‑M2/99‑143 (MQ=255) cTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttc < 2:690183‑M2/143‑38 (MQ=255) cAGTGCCTGGGTATGAATTGAGCTTTCGATAGCAGGGAGCAGCAGTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTGTTGCGGATTAAATAAGTTGggtaatgactccaacttatggatagtgttttatgttcaga > 2:83096‑M2/1‑103 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATAc > 1:596557‑M2/93‑143 (MQ=255) cgcCTGTGTATTATTGCCGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataa > 2:159473‑M2/1‑100 (MQ=255) aacaggagggacagctgatagaaacagaagccactgtagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTTCTCAGATGACGACCGACATTCTCa > 1:270078‑M2/90‑143 (MQ=255) cTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTAACCGGCAATAAAAATTTTTTGCGGATTAAATAAGTTGtgtaatgactccaacttattgatagtgttttatgttcagataatgc < 2:706024‑M2/143‑47 (MQ=255) caggagggacagctgatagacacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAAt < 1:718777‑M2/56‑1 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGAAGGTTTTACCCAGATGACGACCGACATACTCAAtt > 2:317387‑M2/87‑143 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTCCCACGGTGacaacagacatcttccgccag > 1:412079‑M2/85‑133 (MQ=255) gagcgacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtcagtcggcagcatcaccAATAAGTTGATAGCAATGGCGACGGTTTTACCCAGATGACGACCGACATACTCAATTAc > 2:158118‑M2/85‑143 (MQ=255) gaaggatagcggatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGCCATacccaaatcc > 2:692355‑M2/85‑139 (MQ=255) gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACtt < 2:350393‑M2/61‑1 (MQ=255) ggacagctgatagaaacagaagccagtggagcacctcaaaaacaccatcatacactaaatcagtaagtgggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTc < 1:364778‑M2/62‑1 (MQ=255) acagctgatagaaacagaagccactggcgcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccACTAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACCTCCg > 2:321762‑M2/80‑143 (MQ=255) tGCAGCTTTCAATAGCAGGGAGCAGTACTTTATCGGTTTCGTTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt > 1:597562‑M2/1‑86 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGAc > 1:112827‑M2/78‑143 (MQ=255) ctgcgggaaacggaagccactggagcacctcaaaaacaccatcatacactaagtcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGc < 2:39211‑M2/68‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGcc > 1:146858‑M2/75‑143 (MQ=255) aGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttgttgatagtgttctatgttcagataatgcccgatgcctttctc < 2:338094‑M2/143‑61 (MQ=255) aGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 1:794777‑M2/1‑83 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGAc > 2:719694‑M2/71‑143 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcagacactaaatcagtaggttggcagcatagccAATATGTTGATAGCAATGGCGATGGTTTTAGCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTa > 2:643587‑M2/69‑143 (MQ=255) tAGCAGGCAGCAGCACCTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc > 1:348154‑M2/1‑74 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGc > 2:553296‑M2/65‑143 (MQ=255) tagcgactgggcctcctcaagacctccatcatatactaaatcagtaagtttgcagcatccccCATAAGTTGCTAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACGCAATTACTTCCGACGCCAGACTATCGCCt < 2:762130‑M2/81‑1 (MQ=255) cAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac < 1:863273‑M2/143‑73 (MQ=255) gggAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttaggttcggataatgcccgatgacttggtggtgcagctgcgggg < 1:31268‑M2/143‑75 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCcttc > 1:199876‑M2/61‑142 (MQ=255) gcaactggagcacctcaaaaacaccatcatacactaaaccagtaagttggcaccatcaccCATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTCTCGCcttc > 2:868172‑M2/61‑142 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCgttgtt > 1:368898‑M2/58‑143 (MQ=255) accagcactTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCTGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 2:666790‑M2/3‑66 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTtgtgc > 2:576239‑M2/57‑141 (MQ=255) ggagcccctcacaaacaccaccacacactagatcagcaagttggcagcatcaccAATAAGTGGATAGCAACGGCGATGGTTTTACCCAGATGACGAGCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTcgc < 1:592916‑M2/89‑1 (MQ=255) agcaCTTTACCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg > 1:834048‑M2/1‑63 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCttt > 2:822811‑M2/49‑143 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGCTTTACCCAGATGGCGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTCCGCGGCTCTg > 2:379913‑M2/48‑143 (MQ=255) tcaaaaacaccagcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGc < 2:163907‑M2/97‑1 (MQ=255) gcaaaaacaccatcatacacgaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTGTTACCCAGAGGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGc < 1:230897‑M2/97‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGATTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCCTTGTTCGCGGCTTTGCa > 2:634554‑M2/46‑143 (MQ=255) gCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg < 1:599398‑M2/143‑93 (MQ=255) cTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagatgatgcccgatgaccttgtcatgcagcgccacggattgtgagagcgcgcgcgc < 1:100983‑M2/143‑94 (MQ=255) cTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga < 1:905143‑M2/143‑94 (MQ=255) cTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaaaggctccaacctagtgatagtgttttatgtgcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga > 1:565508‑M2/1‑50 (MQ=255) cGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt > 2:697389‑M2/1‑47 (MQ=255) cGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagagaatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt > 1:22766‑M2/1‑47 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGa < 1:235086‑M2/109‑1 (MQ=255) cattcacttattctgtaagttggtagcatcagcAATAAGATGAGAGCAATGGCGATGGGTTGACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGAt < 1:221805‑M2/110‑1 (MQ=255) catacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGAt < 1:131926‑M2/110‑1 (MQ=255) atacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTGTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCACCTTTGTTCGCGGCTTTGCAGATAGTTATGatc > 1:276096‑M2/33‑142 (MQ=255) atacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTATACCCAGCTGACGAACGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGCTCGCGGCTTTGCgggtagttcgactg > 2:459103‑M2/33‑137 (MQ=255) actaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATAGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCACCGCCAGACTATCGCCTTGGTTCGCGGCTTTGCAGAGGGTTTTGATtgtca > 2:515255‑M2/29‑141 (MQ=255) aCCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagagattaatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagcacgaccgctactgccagcccagc < 2:873429‑M2/143‑107 (MQ=255) cGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccg < 1:290606‑M2/143‑109 (MQ=255) ggCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt > 1:726372‑M2/1‑34 (MQ=255) ggCAATAACAATTTTTTGCGGATTAAATAAGTTAggaaacgagttcaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt > 1:855730‑M2/1‑34 (MQ=255) aatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAgtc < 2:843369‑M2/119‑1 (MQ=255) cagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAgtcgtc < 1:757139‑M2/122‑1 (MQ=255) taagttggcagcatcaccAATGCGGGGATAGCCAGGGCGATGGTGTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAg < 1:522008‑M2/125‑1 (MQ=255) taagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAg < 1:227345‑M2/125‑1 (MQ=255) taagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAg > 2:854839‑M2/19‑143 (MQ=255) cAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg > 2:807475‑M2/1‑26 (MQ=255) cAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatgttgagaacgacagcgacttccgtaccagccgtgccaggtg < 2:254789‑M2/143‑118 (MQ=255) ggttggcagcatcaccAATACTGTGAGAGCAATCGCGATGGTTTTACCCAGATGACGACCGACATACTCAAGTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCg < 2:94217‑M2/127‑1 (MQ=255) ttggcagcatctccAATTAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCGAGGCTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATTGTGCAGTCGTACAGAGGc < 2:369500‑M2/129‑1 (MQ=255) tttgtGCGGATTAAATAAGATGtgtaatgactacaacttagcgagagtgttttatgttcagataatgcccgattcctttgtcatgcggctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc > 1:147016‑M2/1‑22 (MQ=255) ttgcatcaatAATATATTGACAGCAATGGGGATGGTAGCACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCAcgc < 1:350151‑M2/133‑1 (MQ=255) gcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCATATTACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCgg < 1:856008‑M2/135‑1 (MQ=255) cGGCTTAAATAAGTTGggcaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga > 1:62161‑M2/1‑16 (MQ=255) gATTAAATAAGTTGggtaatgtctccaacttattgatagtgttttatggtcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt > 1:468788‑M2/1‑14 (MQ=255) gATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtaccagccgtcccaggtgctacctcagatt < 2:571677‑M2/143‑130 (MQ=255) cgtgttgtgggtaatgactccaacttattgatagtgttttatgtgcagataatgctcgatgactttgtcatgcagcttcgccgattttgataacgacagtgacttccgtcccagccgtgccaggtgctgcctcagattcaggt > 2:797067‑M2/8‑9 (MQ=255) tAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGCTTTGATGGTGCAGTCGTCCAGCGGCCCGCGGCTCTGGTAGc > 2:205824/1‑143 (MQ=255) aGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg > 1:291347‑M2/1‑5 (MQ=255) gTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTCGCCCt > 1:53491/1‑143 (MQ=255) gTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCGTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTAGCCCt < 2:596557/143‑1 (MQ=255) gATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTAGCCCTGCt > 1:83250/1‑143 (MQ=255) | CTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTAGCCCTGCT > NC_000913/700464‑700747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |