New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1691425 =	NA (NA)	4 (0.090) +GATTTTGCGTTTGTCATCAGACTT	4/234	6.5	NA	noncoding (1/97 nt)	RIP126 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site	RIP126 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 4470517	NA (NA)					intergenic (+195/+11)	mgtA/ridA	magnesium transporter/enamine/imine deaminase, reaction intermediate detoxification
Rejected: Coverage evenness skew score above cutoff.

GAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGG  >  NC_000913/1691289‑1691560                                                                                                                                         |                                                                                                                                        gaagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGAt                                                                                                                                   >  2:156439/1‑143 (MQ=255) gaagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGAt                                                                                                                                   <  1:586466/143‑1 (MQ=255)  aagaTTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTGTCACTCCGGCGTTTTCATCTGAAAACCAACCAGAGATTGCCTGagg                                                                                                                                  >  2:556443/1‑141 (MQ=255)       tttGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTa                                                                                                                             <  2:253714/143‑1 (MQ=255)        ttgttgGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTAc                                                                                                                            >  1:732897/1‑143 (MQ=255)              gCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGCGATTGCCGGATGCGCTACGCTGAt                                                                                                                      >  2:508741/1‑143 (MQ=255)               cATGTTTGCGATGCCAGCTCGTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCCGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATc                                                                                                                     <  1:323288/143‑1 (MQ=255)                aTGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGACTTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCa                                                                                                                    <  2:630019/143‑1 (MQ=255)                       cGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                                             <  1:685519/143‑1 (MQ=255)                           gccggccgttATCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATGTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCttt                                                                                                         <  2:469260/135‑1 (MQ=255)                             cAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTc                                                                                                       >  1:812261/1‑143 (MQ=255)                              aGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACGCCGGCGTGTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTcc                                                                                                      <  2:21244/143‑1 (MQ=255)                                 tctTAACGTTCCGGCTGCACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGc                                                                                                   <  1:435451/143‑1 (MQ=255)                                  ctTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTCCGCTTATCACGCCTACCTTTTCCTCCa                                                                                                  >  2:199509/1‑143 (MQ=255)                                   ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCac                                                                                                 >  2:767289/1‑142 (MQ=255)                                   ttAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCaa                                                                                                 <  2:871258/143‑1 (MQ=255)                                   ttAACGTTCCGGCTGTACCGGCAATTACGCAGCCTTTAGTCCCGGCCAAAACGCCGGAGAATTTTCACTCCGGCCTTTTCATCTGAAAACAAACCACAGATTGCCTGACGGCCCACCCTCAACCGGCCCACCTTCTCCTgaca                                                                                                 >  2:513634/1‑140 (MQ=255)                                     aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAaca                                                                                               <  2:28651/143‑1 (MQ=255)                                     aaCGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATGCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAaca                                                                                               <  1:685974/143‑1 (MQ=255)                                        gTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCCGGCCTACCCTTTCCTGCacgcctc                                                                                            >  2:923867/1‑137 (MQ=255)                                        gTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACtt                                                                                            <  1:89109/143‑1 (MQ=255)                                         ttgcGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAGCGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACttt                                                                                           <  2:897442/140‑1 (MQ=255)                                               cTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAAttt                                                                                     <  2:671386/143‑1 (MQ=255)                                                 gTACCGGCAATTCCGCAGCACCAAAGCCCGGCCATAATTCGGGAGAATGTTCACTGCGGCGTTTTCATCTGAAACCAAACCAGAGATTGCCTGATGCGCTACGCTTATCCGGCCTACCTTTTCCTGCACCACTTCGCATTTAt                                                                                   >  2:914747/1‑143 (MQ=255)                                                      ggCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCCTCTGCAAACCAACCAGAGATTGCCTGATGCGCTACGCTTATCACGCCTCCCTCTTCCCGCAACCCTTCCAAtttcggagct                                                                              >  2:357953/1‑136 (MQ=255)                                                          aTTGCGCAGCAGGAATTCACGGCCAAAGCGCCGGAGAATTGTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGTGCTACGCAGATCATGCCCACATTTTCCTGCGACACTTTGAATTTATGAGTTTTTg                                                                          <  1:352837/143‑1 (MQ=255)                                                           ttCCGCAGGAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCTGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGt                                                                         <  1:864479/143‑1 (MQ=255)                                                               gcagcaGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGc                                                                     >  1:731096/1‑143 (MQ=255)                                                                 agcagTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTg                                                                   <  2:732615/143‑1 (MQ=255)                                                                    agTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGAt                                                                >  1:15877/1‑143 (MQ=255)                                                                      tAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATac                                                              >  1:69334/1‑142 (MQ=255)                                                                        aTTCACGGCCAAAACGCCGGAGACTTTTTTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAgg                                                            <  1:831277/143‑1 (MQ=255)                                                                                  aaaaCGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTAcgcc                                                  <  1:520194/143‑1 (MQ=255)                                                                                          ggAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTCTGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCgg                                          <  2:216160/143‑1 (MQ=255)                                                                                           gagaATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCGTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTGGGCTGGATAAGGCGTTTACGCCGCATCCGGc                                         >  1:476258/1‑143 (MQ=255)                                                                                               aTTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATaa                                     >  2:264115/1‑143 (MQ=255)                                                                                                ttttCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATaaa                                    >  2:331449/1‑143 (MQ=255)                                                                                                   tgtcTCAGGCGGTTTCATCTGAAAGCAGGCCATGGGTTGCCTGGTGCGCTACGGTTGTCAGGCCTACCGTCTCCTGCAACACTGTGAATTGATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATaaaaaa                                 <  2:779948/140‑1 (MQ=21)                                                                                                         cGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGCTAAGGCGTTTACGCCGCATCCGGCATAACACACGCGCa                           >  2:695785/1‑143 (MQ=255)                                                                                                            cGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCAGCATCCGGCATAAAAGACGCGCACtt                        >  2:859961/1‑143 (MQ=255)                                                                                                             gctttCATCTGCAACCAACCCCGAGATTGCGTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACttt                       <  1:632587/141‑1 (MQ=37)                                                                                                                  cATCTGAACACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTcaa                  <  2:605727/143‑1 (MQ=255)                                                                                                                    tCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTcaaca                >  2:126975/1‑143 (MQ=255)                                                                                                                       gAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACCTTGAATTTATGAGTTTTTGTAGGCTCGATAACGCCTACGCGTTGAATGCGGCATAAAAAACGCGCCCTTTGTCAGCAATc             >  2:193115/1‑143 (MQ=25)                                                                                                                          aacaaacCAGGGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGa          <  2:865059/143‑1 (MQ=255)                                                                                                                          aacaaacCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCGGa          >  1:571322/1‑143 (MQ=255)                                                                                                                            caaacCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGaaa        <  1:274667/143‑1 (MQ=255)                                                                                                                                  agagATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACCCTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGCCAACAATCTGAAACGCCgg  >  1:730220/1‑143 (MQ=255)                                                                                                                                         |                                                                                                                                        GAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAATTCACGGCCAAAACGCCGGAGAATTTTCACTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACACTTTGAATTTATGAGTTTTTGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCATAAAAAACGCGCACTTTGTCAACAATCTGAAACGCCGG  >  NC_000913/1691289‑1691560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.