| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 121 [0] | [0] 127 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 120 (1.660) | 49/68 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 120 total aligned reads displayed.
TAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389864‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGG > NC_000913/399806‑399839 TAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:6999354/35‑1 AATTTTATATTCACTGAAAATATTTTTAATCTTGA > 1:4648732/1‑35 AATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:2812963/35‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:1220441/1‑35 ATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:4816138/35‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:1116836/35‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:1468086/35‑1 TTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:3372202/35‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:7246617/1‑35 TTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:1666668/1‑35 TTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:158941/35‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:1747545/1‑35 TTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:3758826/1‑35 TTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:6522651/1‑35 TATATTCCCTGAAAATATTTTTAATCTTGAATATT > 1:6439282/1‑35 TATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:3524356/35‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATT > 1:459811/1‑35 TATATTCACTGAAAATATTTTTAATCTTGAATATT > 1:7803123/1‑35 ATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:6648479/1‑35 ATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:4354790/1‑35 ATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:6860403/1‑35 ATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:5388669/35‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:3727292/1‑35 TATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:6258633/1‑35 TATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:2622153/1‑35 TATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:5096560/35‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:55071/1‑35 TATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:1919487/35‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:7006431/1‑35 TATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:1605996/1‑35 TATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:7314395/35‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:5044856/35‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:4569820/1‑35 ATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:4064056/35‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:3368635/1‑35 ATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:1785994/1‑35 TTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:7804485/1‑35 TTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:3766840/1‑35 CACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:1767271/1‑35 ACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:2180322/1‑35 ACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:5151865/1‑35 CTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:6694877/1‑35 CTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:2525091/1‑35 TGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:965822/35‑1 TGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:3536554/35‑1 TGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:3672440/35‑1 TGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:577907/35‑1 GAAAATATTTTTAATCTTGAATATTATCGGGCGTT > 1:2055180/1‑35 GAAAATATTTTTAATCTTGAATATTATCGGGCGTT > 1:3877129/1‑35 AAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:877971/1‑35 AAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:2846681/35‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:7645305/35‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:5636176/1‑35 AAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:5500996/1‑35 AATATTTTTAATCTTGAATATTATCGGGCGTTAAA > 1:5017495/1‑35 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:3078821/1‑35 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:639068/1‑35 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:6618999/1‑35 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:6840432/35‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAAT > 1:3007553/1‑35 TATTTTTAATCTTGAATATTATCGGGCGTTAAAAT > 1:3971464/1‑35 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:2524277/35‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:4908563/35‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:1725054/1‑35 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:6420328/35‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:4579535/35‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:1640737/35‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:1374336/35‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:5914688/1‑35 TTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:6050186/1‑35 TTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:670284/35‑1 TTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:4268717/35‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:3085303/35‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:2723459/35‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:4810376/1‑35 TTAATCTTGAATATTATCGGGCGTTAAAATATTAC > 1:2645653/1‑35 TTAATCTTGAATATTATCGCGCGTTAAAATATTAC > 1:1671465/1‑35 TAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:1974463/1‑35 TAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:7506412/1‑35 TAATCTTGAATATTATCGGGCGTTAAAATATTACA < 1:5460419/35‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:7264519/1‑35 TAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:5300430/1‑35 AATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:2870192/1‑35 AATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:4572170/1‑35 AATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:3440495/1‑35 ATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:2509967/35‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:4043148/1‑35 ATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:647406/1‑35 ATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:1245651/35‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:3172206/1‑35 ATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:2833858/1‑35 TCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:6207980/1‑35 TTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:515835/1‑35 TTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:1784959/1‑35 TTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:2967014/1‑35 TTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:1902285/1‑35 TTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:844459/1‑35 TGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:7021874/1‑35 TGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:7113453/35‑1 TGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:5968744/35‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389864‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGG > NC_000913/399806‑399839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |