| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 75 [0] | [0] 75 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 73 (1.010) | 39/68 | 0.0 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
GGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTG > NC_000913/549583‑549651 | gcgccaccctaaagcagcgcatccgcaatgatgtg < 1:3868785‑M2/1‑1 (MQ=255)gcgccaccctaaagcagcgcatccgcaatgatgtg < 1:7478691‑M2/1‑1 (MQ=255)gcgccaccctaaagcagcgcatccgcaatgatgtg < 1:1492636‑M2/1‑1 (MQ=255)gcgccaccctaaagcagcgcatccgcaatgatgtg < 1:2119802‑M2/1‑1 (MQ=255) cgccaccctaaagcagcgcatccgcaatgatgtgg < 1:7220350‑M2/2‑1 (MQ=255) cgccaccctaaagcagcgcatccgcaatgatgtgg < 1:5446512‑M2/2‑1 (MQ=255) cgccaccctaaagcagcgcatccgcaatgatgtgg < 1:6949428‑M2/2‑1 (MQ=255) cgccacccgaaagcagcgcatccgcaatgatgtgg < 1:6068953‑M2/2‑1 (MQ=255) gccaccctaaagcagcgcatccgcaatgatgtGGa < 1:6511802‑M2/3‑1 (MQ=255) ccaccctaaagcagcgcatccgcaatgatgtGGaa > 1:7559087‑M2/32‑35 (MQ=255) ccctaaagcagcgcatccgcaatgatgtGGAAcgc > 1:1500211‑M2/29‑35 (MQ=255) ccctaaagcagcgcatccgcaatgatgtGGAAcgc > 1:153015‑M2/29‑35 (MQ=255) cctaaagcagcgcatccgcaatgatgtGGAAcgcg > 1:5639526‑M2/28‑35 (MQ=255) ctaaagcagcgcatccgcaatgatgtGGAACgcgc > 1:7341803‑M2/27‑35 (MQ=255) ctaaagcagcgcatccgcaatgatgtGGAACgcgc > 1:7485703‑M2/27‑35 (MQ=255) taaagcagcgcatccgcaatgatgtGGAACGCGCa < 1:1147861‑M2/10‑1 (MQ=255) aaagcagcgcatccgcaatgatgtGGAACGCGCaa < 1:7465615‑M2/11‑1 (MQ=255) aaagcagcgcatccgcaatgatgtGGAACGCGCaa < 1:6323903‑M2/11‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:1990480‑M2/12‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:5036049‑M2/12‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAAt > 1:187292‑M2/24‑35 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAAt < 1:4564518‑M2/12‑1 (MQ=255) agcagcgcatccgcaatgatgtGGAACGCGCAATg > 1:661883‑M2/23‑35 (MQ=255) agcagcgcatccgcaatgatgtGGAACGCGCAATg > 1:6250829‑M2/23‑35 (MQ=255) cagcgcatccgcaatgatgtGGAACGCGCAATGAc < 1:5147374‑M2/15‑1 (MQ=255) agcgcatccgcaatgatgtGGAACGCGCAATGACg < 1:5381856‑M2/16‑1 (MQ=255) gcgcatccgcaatgatgtGGAACGCGCAATGACGa < 1:2092827‑M2/17‑1 (MQ=255) gcgcatccgcaatgatgtGGAACGCGCAATGACGa < 1:4891059‑M2/17‑1 (MQ=255) cgcatccgcaatgatgtGGAACGCGCAATGACGat < 1:3778200‑M2/18‑1 (MQ=255) cgcatccgcaatgatgtGGAACGCGCAATGACGat < 1:2046794‑M2/18‑1 (MQ=255) gcatccgcaatgatgtGGAACGCGCAATGACGatc < 1:3166892‑M2/19‑1 (MQ=255) catccgcaatgatgtGGAACGCGCAATGACGatca < 1:456797‑M2/20‑1 (MQ=255) ttccgcaatgatgtGGAACGCGCAATGACGatcat < 1:1481041‑M2/21‑1 (MQ=255) tccgcaatgatgtGGAACGCGCAATGACGatcatc < 1:5533712‑M2/22‑1 (MQ=255) tccgcaatgatgtGGAACGCGCAATGACGatcatc < 1:7513366‑M2/22‑1 (MQ=255) tccgcaatgatgtGGAACGCGCAATGACGatcatc > 1:7494645‑M2/14‑35 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATcatcca > 1:7673111‑M2/12‑35 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATcatcca < 1:1138155‑M2/24‑1 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATcatcca > 1:1622811‑M2/12‑35 (MQ=255) cgcaatgatgtGGAACGCGCAATGACGATcatcca < 1:5497760‑M2/24‑1 (MQ=255) gcaatgatgtGGAACGCGCAATGACGATcatccat < 1:7312134‑M2/25‑1 (MQ=255) caatgatgtGGAACGCGCAATGACGATcatccatc > 1:3163823‑M2/10‑35 (MQ=255) caatgatgtGGAACGCGCAATGACGATcatccatc < 1:7358401‑M2/26‑1 (MQ=255) caatgatgtGGAACGCGCAATGACGATcatccatc < 1:1237211‑M2/26‑1 (MQ=255) caatgatgtGGAACGCGCAATGACGATcatccatc < 1:5615734‑M2/26‑1 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc < 1:6126698‑M2/27‑1 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc > 1:5562007‑M2/9‑35 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc < 1:7763515‑M2/27‑1 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc > 1:1947017‑M2/9‑35 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc > 1:4779970‑M2/9‑35 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc < 1:1050208‑M2/27‑1 (MQ=255) aatgatgtGGAACGCGCAATGACGATCatccatcc < 1:442719‑M2/27‑1 (MQ=255) atgatgtGGAACGCGCAATGNCGATCATCCATCct < 1:4090069‑M2/28‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCct > 1:5395768‑M2/8‑35 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCct < 1:1246670‑M2/28‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCct < 1:7357001‑M2/28‑1 (MQ=255) tgatgtGGAACGCGCAATGACGATCATCCATCctc < 1:4728296‑M2/29‑1 (MQ=255) tgatgtGGAACGCGCAATGACGATCATCCATCctc < 1:1807430‑M2/29‑1 (MQ=255) gatgtGGAACGCGCAATGACGATCATCCATCctct < 1:4384339‑M2/30‑1 (MQ=255) gatgtGGAACGCGCAATGACGATCATCCATCctct > 1:3753390‑M2/6‑35 (MQ=255) gatgtGGAACGCGCAATGACGATCATCCATCctct < 1:2741460‑M2/30‑1 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTg < 1:1123473‑M2/31‑1 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTg > 1:5390371‑M2/5‑35 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTg > 1:2292546‑M2/5‑35 (MQ=255) atgtGGAACGCGCAATGACGATCATCCATCCTCTg > 1:6362094‑M2/5‑35 (MQ=255) tgtGGAACGCGCAATGACGATCATCCATCCTCTGc < 1:7608867‑M2/32‑1 (MQ=255) tgtGGAACGCGCAATGACGATCATCCATCCTCTGc > 1:2325630‑M2/4‑35 (MQ=255) gtGGAACGCGCAATGACGATCATCCATCCTCTGCt > 1:2545591‑M2/3‑35 (MQ=255) gtGGAACGCGCAATGACGATCATCCATCCTCTGCt < 1:3857709‑M2/33‑1 (MQ=255) gtGGAACGCGCAATGACGATCATCCATCCTCTGCt < 1:5779668‑M2/33‑1 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCtt > 1:1953449‑M2/2‑35 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCtt > 1:1853728‑M2/2‑35 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCtt > 1:4097488‑M2/2‑35 (MQ=255) ggAACGCGCAATGACGATCATCCATCCTCTGCTTg < 1:6734038/35‑1 (MQ=255) ggAACGCGCAATGACGATCATCCATCCTCTGCTTg < 1:1238224/35‑1 (MQ=255) | GGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTG > NC_000913/549583‑549651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |