| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 81 [0] | [0] 85 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 81 (0.970) | 52/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:4529205/1‑50GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:4771539/50‑1GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:5476890/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:724516/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:4865385/50‑1 CTGATTTCGCATAGCAATAAAGAGAATCTGGGCCGAATGAAATTCCCATG > 1:4023000/1‑50 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:1726402/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCG < 1:5533429/50‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:5846980/49‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:486153/49‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1972177/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:4441322/49‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:56449/48‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:854349/48‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:4831669/47‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:4713372/47‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:4994275/1‑48 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:6367818/49‑1 CGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT > 1:4131801/1‑50 CGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT > 1:1853595/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:5722382/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2822908/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2059004/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2766529/49‑1 GCACAGCAATAAAGAGAACATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:4741007/49‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:747696/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:2928823/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:6272484/50‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3738870/1‑49 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA > 1:3616098/1‑50 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA > 1:6108529/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:1058042/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:2784697/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:4049246/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:3388608/1‑49 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:5665620/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT > 1:1695103/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA < 1:5277172/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:1241849/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:4698567/50‑1 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:4024563/50‑1 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:1784146/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:3582549/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:4645454/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:4432402/1‑49 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:5613214/1‑49 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA > 1:5822445/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:5866683/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:3731068/1‑50 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:1265959/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:2906720/1‑50 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:1286007/50‑1 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:3803651/1‑49 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:1673520/1‑50 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT < 1:5818328/50‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:3364365/1‑50 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT < 1:3749772/50‑1 CGAATGAAATTCCCATAGCGAGTTCTGCATTATCCATTGCATTTATATCT < 1:4329790/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:481460/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:5175748/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:1353106/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:326023/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:1220477/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:3741606/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:2247997/1‑49 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:3367466/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:6223693/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:5886009/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:3000164/1‑49 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:1259409/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:5027491/50‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:2155756/50‑1 GAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:6239077/1‑48 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:1252377/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:4016542/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:4187488/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:5835239/50‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:4530955/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:2204839/1‑48 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:3203495/1‑47 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:5753858/50‑1 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |