| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 84 (1.010) | 60/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
CAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066256‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080592‑2080640 CAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:4687032/1‑50 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:397716/50‑1 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:238687/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:5387837/50‑1 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:1343588/50‑1 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:5210844/50‑1 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:4906357/50‑1 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:3316903/1‑49 CTATTTAGACCGTTTCTTCGCCATTCAAGGCGTTATCCCCAGTTTGCAG > 1:5801071/1‑49 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:4246808/1‑49 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:5132511/1‑49 TATTTAGACCGTTTCTTAGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:5952053/1‑49 ATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAA > 1:1619222/1‑50 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC > 1:252485/1‑50 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:5450292/50‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAA < 1:3010441/49‑1 TTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT > 1:661240/1‑50 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC > 1:6227680/1‑50 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:5397937/49‑1 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:3083043/49‑1 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:1644649/1‑50 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:2989378/1‑50 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC < 1:4947663/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGACACTCCG > 1:809094/1‑50 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG < 1:2688184/50‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:4108549/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:3247437/49‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:1000204/1‑49 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:2039206/1‑49 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:4913979/50‑1 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:4182383/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT < 1:2993773/50‑1 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:4718995/50‑1 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:1916971/50‑1 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:1669223/1‑49 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:3142720/1‑48 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:750509/49‑1 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGA < 1:5817887/47‑1 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGA < 1:1136764/47‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:5236045/50‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:3299101/50‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA > 1:257570/1‑49 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:4453760/1‑49 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA < 1:3758378/50‑1 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA < 1:4601456/50‑1 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:5640909/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:2362647/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC > 1:2028779/1‑50 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:786255/1‑50 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC < 1:4083450/49‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC < 1:2724525/49‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:3393449/50‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:3475593/50‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:125701/49‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:73287/1‑49 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:1213615/1‑49 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA < 1:3957491/50‑1 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA > 1:5106486/1‑50 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAAGGAGATTAAAAGCGCGCA < 1:1171187/50‑1 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:4397943/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATA < 1:380270/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATA < 1:3426208/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:555114/1‑49 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:4991159/1‑50 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:5859571/1‑50 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:3268440/1‑50 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:4482944/1‑50 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT < 1:3731139/49‑1 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCA > 1:1721651/1‑50 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATC < 1:4884214/50‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:4532607/50‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:1321402/50‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT > 1:3050132/1‑50 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:2910065/50‑1 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG > 1:55069/1‑50 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG > 1:662766/1‑50 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG > 1:790683/1‑50 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT < 1:267566/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > 1:201268/1‑50 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG < 1:1474899/50‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > 1:3750311/1‑50 TTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > 1:3379129/1‑50 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > 1:6360221/1‑50 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG < 1:1235618/49‑1 CAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066256‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080592‑2080640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |