| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 76 [0] | [0] 76 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 62 (0.900) | 39/82 | 0.1 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:4762336/1‑50 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:6043374/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:5885750/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:2717920/50‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:1051236/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:6422561/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTC < 1:6169897/49‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:765792/48‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:2252513/1‑48 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:5895173/1‑48 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:4620338/48‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:3831261/1‑48 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:2811836/1‑48 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:1971602/1‑50 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:351025/1‑50 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:732666/1‑50 ATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:5003487/1‑49 ATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:3822121/1‑49 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGA < 1:2066230/50‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGA < 1:6080714/50‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:762170/1‑49 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:6013758/49‑1 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG < 1:2744774/50‑1 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAA < 1:4697065/49‑1 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAA < 1:1090821/49‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:4104609/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:6141657/1‑49 TGCCGAACAATGTGGTCTTTAGCTTCATAAGTCGTTCCCTCAGGAAGGA > 1:614963/1‑49 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAA < 1:5656781/49‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT > 1:5555994/1‑50 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT < 1:3253518/50‑1 GAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC < 1:3582633/50‑1 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:552483/50‑1 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:753791/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:5799602/1‑50 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA < 1:245627/50‑1 GTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT > 1:1107386/1‑50 GTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT > 1:5484597/1‑50 GTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT > 1:5599260/1‑50 gGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATT < 1:3659842/49‑1 GGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:3915543/1‑50 GGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:3502505/1‑50 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:4695143/1‑49 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:1846418/49‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:715783/49‑1 CTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC > 1:2419172/1‑50 TTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG > 1:2204886/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC < 1:2794670/47‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:4673678/49‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:6346982/1‑49 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT < 1:5212225/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA > 1:3250530/1‑50 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA > 1:5068660/1‑50 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTC < 1:2925891/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTC < 1:6136349/49‑1 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:1514288/1‑50 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC < 1:3510560/50‑1 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:1686181/1‑50 TCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG > 1:4416754/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:5266830/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:211645/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:1455150/49‑1 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:2357337/49‑1 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:5783644/49‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:2278149/1‑49 TAAGTTGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:497762/1‑50 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:1401728/1‑50 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:2196974/1‑50 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:3663806/1‑50 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACA < 1:1260895/50‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACA < 1:1241940/50‑1 AGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCAC > 1:2132667/1‑49 TCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAC < 1:1033397/50‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCG < 1:3226299/50‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:5503096/1‑49 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:1285697/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:2952141/1‑49 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:3796894/1‑49 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:5017131/1‑49 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:4387634/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:1012693/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT < 1:1604541/49‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:2540846/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC < 1:1833079/50‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:3345595/1‑50 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG < 1:1010117/50‑1 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG < 1:2217173/50‑1 CTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCG < 1:4122740/50‑1 CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:3438283/1‑49 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCC > 1:6007817/1‑49 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCC > 1:5628935/1‑49 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:5852984/50‑1 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:1457345/50‑1 GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA > 1:2383133/1‑49 AAGGAAATGCGAGTGATTTCACCGTTACCGGCACAACCGATCCGCCAAA > 1:4703288/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:2777495/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:5479189/1‑49 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:5028161/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:6165379/1‑48 GGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG < 1:4162133/50‑1 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |