| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 91 [1] | [0] 89 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 1 (0.010) | 84 (1.060) | 49/94 | 0.0 | 99.4% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1882996/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:985917/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:2296806/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:6322155/49‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:2328878/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:3381102/1‑50 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:5644611/50‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:2593673/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5737122/1‑49 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:1021014/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:2622897/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:2989427/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:2705559/49‑1 AACATCTTAGCAGAAAACAAATGATGAATAAGGAATTTTATATTGAGTAT < 1:4358897/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:1656421/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:1628359/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:3294152/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:1605988/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:4654202/50‑1 TCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:4277239/1‑49 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC < 1:5419527/48‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:2114212/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:5638698/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:1357122/46‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:3731639/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:1933035/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:5967115/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:3401869/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:6100305/50‑1 CATAAAACAAATGATGAATAAGGAATGTTATATTGATTATTAGCACTTTA < 1:5962315/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:4776863/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:5210122/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:550820/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:4955231/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:3109443/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:470376/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:4077796/50‑1 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:2021944/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:4039945/49‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:5349817/49‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:4379768/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:4313469/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:3995406/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:6300050/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:4212303/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:5699264/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:5246721/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:1521411/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:5076836/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:490716/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:4291862/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:1148905/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:818310/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:4810131/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:3056998/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:1246879/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:940826/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:2697753/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:873495/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:5557797/49‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:3606976/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4725544/1‑50 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:93233/1‑50 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:3740603/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:5170928/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:2042434/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:569176/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:1128141/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:4488946/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4714650/1‑47 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:6128270/1‑47 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4003167/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:5842404/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:6356454/1‑46 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:696214/1‑46 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:236685/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:3534522/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:401958/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:6226037/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:787206/1‑49 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:292956/1‑50 TATATTGATTATTAGCGCTTTATAATCATTGAATAAAAATAGATTTTATG > 1:3648986/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:521672/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:1686474/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:2373483/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:3466418/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:3806743/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:3969131/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:949000/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:322523/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |