| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 91 [0] | [0] 93 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 88 (1.080) | 57/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCG > NC_000913/1871980‑1872077 | aGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG < 1:5510205‑M1/50‑1 (MQ=255) gCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGat > 1:689415‑M1/1‑48 (MQ=255) gCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGat < 1:3275130‑M1/50‑3 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg < 1:1241595‑M1/50‑4 (MQ=255) ccGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatg > 1:6043998‑M1/1‑47 (MQ=255) gCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg > 1:2514144‑M1/1‑45 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgt < 1:4171847‑M1/50‑7 (MQ=255) cAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcg > 1:4513614‑M1/1‑44 (MQ=255) aaTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta > 1:6093451‑M1/1‑43 (MQ=255) aaTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta > 1:4264372‑M1/1‑43 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtat < 1:2354020‑M1/50‑9 (MQ=255) aTCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgta > 1:584928‑M1/1‑42 (MQ=255) cGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:4177399‑M1/1‑40 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:6386538‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:6066400‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:4136538‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:1781170‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:5694726‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaa < 1:1056101‑M1/50‑12 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:3580804‑M1/1‑39 (MQ=255) gAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtata > 1:2699411‑M1/1‑39 (MQ=255) aCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagc < 1:5813098‑M1/50‑14 (MQ=255) aCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagc < 1:4762334‑M1/50‑14 (MQ=255) aCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagc < 1:2462285‑M1/50‑14 (MQ=255) cTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagct < 1:3687179‑M1/50‑15 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGCAGGAGatgcgtataaagctt > 1:3720672‑M1/1‑35 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt > 1:1989325‑M1/1‑35 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt > 1:6226600‑M1/1‑35 (MQ=255) tttATCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagctt > 1:4705668‑M1/1‑35 (MQ=255) aTCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttcc < 1:2203392‑M1/49‑18 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga > 1:5891986‑M1/1‑31 (MQ=255) tCTGGTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga > 1:269014‑M1/1‑31 (MQ=255) ggTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat > 1:6334966‑M1/1‑28 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgag < 1:3045022‑M1/50‑24 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgag < 1:5179618‑M1/50‑24 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatga < 1:3064168‑M1/49‑23 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatga < 1:6217784‑M1/49‑23 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgat < 1:6382647‑M1/47‑21 (MQ=255) gTTTTCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccga < 1:5400380‑M1/46‑20 (MQ=255) ttttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagc < 1:4747574‑M1/50‑25 (MQ=255) ttttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagc < 1:466976‑M1/50‑25 (MQ=255) tttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcg > 1:6331455‑M1/1‑25 (MQ=255) tttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcg > 1:5333650‑M1/1‑25 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt > 1:1477168‑M1/1‑24 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcg < 1:3434643‑M1/49‑26 (MQ=255) ttCTCGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcg < 1:3025297‑M1/49‑26 (MQ=255) tctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgt < 1:4301554‑M1/49‑27 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:1679030‑M1/49‑28 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:4775433‑M1/1‑22 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt < 1:35734‑M1/49‑28 (MQ=255) ctcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtt > 1:3511847‑M1/1‑22 (MQ=255) tcGTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta > 1:589611‑M1/1‑21 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttata > 1:543079‑M1/1‑19 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttata < 1:5523941‑M1/50‑32 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttata > 1:1317684‑M1/1‑19 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttata > 1:2592691‑M1/1‑19 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttat < 1:5416123‑M1/49‑31 (MQ=255) gTTTCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgttta < 1:654479‑M1/48‑30 (MQ=255) tttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatat > 1:2585313‑M1/1‑18 (MQ=255) ttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg > 1:1494721‑M1/1‑17 (MQ=255) ttCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatg > 1:2432311‑M1/1‑17 (MQ=255) tCACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:2330345‑M1/1‑16 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:4571345‑M1/1‑15 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:1825289‑M1/1‑15 (MQ=255) cACTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgt > 1:5244943‑M1/1‑15 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtca < 1:3625999‑M1/50‑37 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc < 1:451589‑M1/49‑36 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc > 1:2215334‑M1/1‑14 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc > 1:3229175‑M1/1‑14 (MQ=255) aCTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtc > 1:281762‑M1/1‑14 (MQ=255) cTAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:5757062‑M1/1‑13 (MQ=255) tAACCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaa > 1:1137765‑M1/1‑12 (MQ=255) aaCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat > 1:1837659‑M1/1‑11 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:4219715‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:1253157‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataa < 1:2092681‑M1/50‑41 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat > 1:4198497‑M1/1‑10 (MQ=255) aCCGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaat < 1:6262125‑M1/48‑39 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag < 1:820062‑M1/50‑42 (MQ=255) ccGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:6048522‑M1/1‑9 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagc < 1:590051‑M1/50‑43 (MQ=255) cGAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:2399301‑M1/1‑8 (MQ=255) gAAGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataag > 1:4420459‑M1/1‑7 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcaga < 1:629101‑M1/50‑46 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcag > 1:3668994‑M1/1‑5 (MQ=255) aGGAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcag > 1:1702372‑M1/1‑5 (MQ=255) ggAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaa < 1:1964321‑M1/50‑47 (MQ=255) ggAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaa > 1:40941‑M1/1‑4 (MQ=255) ggAGatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaa < 1:4586360‑M1/50‑47 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:2774127‑M1/1‑1 (MQ=255) gatgcgtataaagcttccgatgagcgtttatatgtcaataagcagaaca > 1:4113247‑M1/1‑1 (MQ=255) | AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTGCCATTTATCATGAAATTGCACCATAGAATGCTCCGGCATTTTATCG > NC_000913/1871980‑1872077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |