| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 95 [0] | [0] 95 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 95 (1.170) | 57/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAG > NC_000913/3184733‑3184829 | gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:3823597‑M1/1‑49 (MQ=255)gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:3228518‑M1/1‑49 (MQ=255)gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:5295352‑M1/1‑49 (MQ=255) cTAATGATTAGCGGCAGCAACGCGTAGCTTCACATAATTCTGGTTTATat < 1:3009035‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:908753‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:6279266‑M1/1‑48 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:2653504‑M1/1‑47 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:6315240‑M1/1‑47 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:4317935‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct > 1:1646460‑M1/1‑45 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:4673925‑M1/49‑5 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:4452791‑M1/49‑5 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatat < 1:241454‑M1/49‑5 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa < 1:4481306‑M1/50‑7 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:5459802‑M1/1‑44 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 1:4345657‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:45263‑M1/49‑8 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:587421‑M1/49‑8 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:867769‑M1/50‑10 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 1:2556168‑M1/1‑39 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:2249864‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:1387874‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:5703002‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:4202357‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:3910533‑M1/49‑12 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:657364‑M1/49‑12 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaac < 1:3110648‑M1/50‑14 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 1:3112579‑M1/1‑37 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:4381671‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:3367422‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:2133556‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca < 1:6404564‑M1/50‑15 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:1039468‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:2900363‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:2047106‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:600265‑M1/1‑34 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:2158684‑M1/1‑34 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:2063015‑M1/1‑34 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta > 1:4648124‑M1/1‑32 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaa < 1:6120716‑M1/50‑20 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:5977144‑M1/1‑31 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:4189032‑M1/1‑31 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa < 1:4468806‑M1/50‑21 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa < 1:1987880‑M1/50‑21 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac > 1:3047292‑M1/1‑29 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:846254‑M1/50‑22 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac > 1:3727862‑M1/1‑29 (MQ=255) cGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacg > 1:5405713‑M1/1‑28 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg > 1:4803630‑M1/1‑27 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:4230451‑M1/50‑24 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg > 1:4815774‑M1/1‑26 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:4613916‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:4624820‑M1/1‑25 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcc < 1:6259453‑M1/50‑27 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:4886197‑M1/1‑22 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca < 1:5174344‑M1/49‑28 (MQ=255) cTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatc < 1:1096975‑M1/50‑30 (MQ=255) cTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:5677734‑M1/1‑21 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:6246010‑M1/1‑20 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:1588791‑M1/1‑20 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:4656971‑M1/1‑19 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:1481527‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:2699773‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:1628629‑M1/48‑31 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc > 1:6379715‑M1/1‑17 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc > 1:905043‑M1/1‑17 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg < 1:71068‑M1/49‑33 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg < 1:218936‑M1/49‑33 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc > 1:4961217‑M1/1‑16 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc < 1:6423633‑M1/50‑35 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc < 1:4333460‑M1/50‑36 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc < 1:2117679‑M1/50‑36 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:1594220‑M1/1‑15 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:4412182‑M1/1‑15 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg < 1:2847682‑M1/50‑37 (MQ=255) tAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccg < 1:2170008‑M1/50‑37 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtt < 1:2200716‑M1/50‑39 (MQ=255) tCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:2524706‑M1/1‑10 (MQ=255) tCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:2430440‑M1/1‑10 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:4997659‑M1/1‑9 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:3057122‑M1/1‑9 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:5822712‑M1/49‑41 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:3812421‑M1/49‑41 (MQ=255) gTTTATatctaatacaagcactaaaacaggccatcaggccagttatatca < 1:4006941‑M1/50‑45 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatca < 1:6117811‑M1/50‑45 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatca < 1:2842908‑M1/50‑45 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttata < 1:313972‑M1/47‑42 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag < 1:2437313‑M1/50‑46 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag > 1:2495549‑M1/1‑5 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag > 1:5445229‑M1/1‑5 (MQ=255) ttATatctaatacaaacactcaaacgggccatcaggcccgttatatcagt > 1:4552438‑M1/1‑4 (MQ=255) ttATatctaatacaaacactaaaacgggccatcaggcccgttatatcagt > 1:1841771‑M1/1‑4 (MQ=255) ttATatctaatacaaacactaaaacgggccatcaggcccgttatatcagt > 1:3044484‑M1/1‑4 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc > 1:5478755‑M1/1‑2 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc > 1:3618278‑M1/1‑2 (MQ=255) | GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAG > NC_000913/3184733‑3184829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |