| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 82 [0] | [0] 82 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 63 (1.040) | 43/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:2342421/50‑1CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:818411/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:281806/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:2755945/1‑49 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:1563807/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:3225979/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:3925843/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:246327/1‑49 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:2545871/1‑48 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG < 1:1425727/50‑1 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG > 1:1824389/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:1311222/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:1533124/1‑50 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:5564617/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:2486865/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:2417002/1‑49 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:5203004/1‑49 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA < 1:4481144/50‑1 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:1121432/1‑48 GATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAG > 1:1804583/1‑50 GATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAG < 1:2733192/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:4362855/50‑1 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:2569801/1‑50 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:3400360/50‑1 ttATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:3169035/3‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 1:375437/49‑1 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:1911491/1‑49 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 1:2962001/1‑49 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:3535458/50‑1 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:3397725/50‑1 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 1:2814202/50‑1 CAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 1:1101991/1‑47 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:27923/50‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 1:3487397/50‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 1:3404459/1‑46 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA > 1:1232472/1‑49 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:941467/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:4228540/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:2919907/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:1699623/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:1169722/50‑1 ATTTACCGCACTAGGCTCGTATATTCGTGAAGGTAAGTGCAAAGATAATC > 1:5092467/1‑50 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:4790798/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 1:1778847/50‑1 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:4682532/49‑1 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:390678/49‑1 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:3913293/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTC < 1:209846/50‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:2711769/50‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:507283/50‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT > 1:3858359/1‑50 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:1725137/50‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT > 1:2949406/1‑50 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 1:3961218/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:3149174/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:3578581/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT > 1:4294085/1‑50 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:211013/1‑49 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:4854838/48‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:3959018/48‑1 GCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT > 1:2917704/1‑50 GCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT < 1:4507474/50‑1 gCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:2671285/49‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:2627015/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:1497672/50‑1 CGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT < 1:3150671/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:65882/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:812868/1‑50 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT > 1:770439/1‑50 ATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG > 1:3018423/1‑50 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:2401723/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:2164022/50‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 1:2953558/1‑50 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 1:3217584/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT > 1:3228538/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT < 1:4000832/50‑1 TCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG > 1:1399851/1‑50 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG > 1:1294900/1‑49 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG > 1:5450627/1‑49 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA < 1:5071012/50‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA > 1:5327768/1‑50 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA > 1:5317742/1‑50 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:1485172/50‑1 GAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG > 1:1268058/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC < 1:980707/50‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC > 1:491918/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC > 1:2029876/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:1909253/49‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG < 1:511160/50‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG < 1:1939150/50‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG > 1:2291473/1‑50 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG < 1:2925855/50‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 1:2632638/50‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 1:906013/50‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC < 1:2070276/50‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC < 1:1705576/50‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC < 1:2239239/50‑1 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA < 1:1760673/50‑1 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 1:3947550/1‑49 AAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > 1:5560228/1‑50 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |