| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 89 [0] | [0] 89 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 89 (1.220) | 64/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > NC_000913/683371‑683417 GTCTGATTTCGCACAGCCATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:3465000/50‑1GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:5274270/1‑50GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:5192995/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT > 1:2330321/1‑50 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:1114175/50‑1 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:778389/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:4860705/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:298075/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:573957/1‑50 GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:56113/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCG < 1:731566/50‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:3280926/48‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGA < 1:1198913/50‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:4487434/1‑48 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:5319900/49‑1 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:1813559/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:2681275/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:2526617/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:5413019/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:408655/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:5045569/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2156295/49‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:206844/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:4048558/1‑50 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3631110/1‑50 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:1687106/50‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC < 1:5128318/50‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3999019/1‑49 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA < 1:536185/50‑1 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:1186400/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:2368931/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:2675768/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:1392442/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT > 1:4670534/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT > 1:4002716/1‑50 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:5378345/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:793218/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:4178062/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA < 1:3887218/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:5197296/49‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:3790312/49‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:2061914/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:4924403/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:3962814/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:589325/1‑50 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:5243254/50‑1 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT > 1:2705977/1‑50 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:168849/1‑50 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:1882596/1‑49 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:1309490/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT < 1:1481886/50‑1 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:1856259/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:2617115/1‑50 ATATGGGCCGAATGAAATTACCATGGCGAGTTCTGCATTATCCATTGCAT < 1:2469385/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:1153739/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:1431362/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:5055590/1‑50 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:1717927/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTT < 1:1436786/49‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTT < 1:461822/49‑1 GCCGAATGGAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT > 1:3603416/1‑50 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:3648118/50‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:3834132/1‑50 CGAATGAAATTCCCATGGCGAGTTCTGCATTACCCATTGCATTTATATCT < 1:841374/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:2245337/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:4712100/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:5083818/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:3499383/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:3092539/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:1535974/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:5264605/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:575299/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:752212/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:2316146/50‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:3855162/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:4576269/1‑49 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:3418229/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:2282281/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:3973523/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG > 1:1912175/1‑49 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:2801238/50‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:4827679/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:1592173/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:3277313/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA > 1:1424438/1‑49 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:3804319/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:5338952/1‑48 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:3950896/49‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > 1:1492036/1‑48 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > NC_000913/683371‑683417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |