New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 87 (1.200) | 52/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080544‑2080640 | agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1131499‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:2974925‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:2766653‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:4744607‑M2/2‑1 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1289759‑M2/47‑47 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa < 1:1772938‑M2/5‑1 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:5178807‑M2/45‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:5319689‑M2/45‑49 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa < 1:1686244‑M2/7‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:784331‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:3014102‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:4973655‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:5078947‑M2/8‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc > 1:540735‑M2/43‑50 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt < 1:1227803‑M2/9‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:59905‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:4452905‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:2459279‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:2722391‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg < 1:1518767‑M2/12‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg < 1:4071866‑M2/12‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:3072304‑M2/13‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:4791170‑M2/13‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:1345127‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:3497400‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:3040098‑M2/16‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:4345581‑M2/16‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1892606‑M2/34‑49 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:2411939‑M2/18‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:4162666‑M2/18‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:1141655‑M2/19‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:3025899‑M2/19‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:2147947‑M2/19‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt > 1:3572167‑M2/28‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:3324513‑M2/22‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 1:4138301‑M2/21‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:2651135‑M2/23‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa > 1:3641354‑M2/27‑49 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa > 1:1214352‑M2/27‑49 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:2762044‑M2/25‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:4925565‑M2/26‑49 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:3614132‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:3420063‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:787707‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:1574339‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2178300‑M2/25‑48 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:4525981‑M2/25‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:537569‑M2/24‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:4790340‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:3802443‑M2/28‑1 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:2860852‑M2/22‑50 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:2406478‑M2/22‑50 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:3661135‑M2/22‑50 (MQ=255) ttaaggcgttatccccagtctGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:1051492‑M2/22‑50 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:721074‑M2/31‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:4732830‑M2/32‑1 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:4962471‑M2/18‑50 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:3670018‑M2/17‑49 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:4125878‑M2/34‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:2685382‑M2/34‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:5308697‑M2/34‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:4515545‑M2/34‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 1:3883426‑M2/16‑49 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:161269‑M2/15‑50 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa < 1:4762209‑M2/36‑1 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:1975792‑M2/14‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:2533502‑M2/14‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:735042‑M2/14‑50 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:2844665‑M2/13‑50 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:3199732‑M2/12‑49 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:2576184‑M2/38‑1 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:2410123‑M2/38‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:882415‑M2/39‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:2765294‑M2/39‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:1656857‑M2/39‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:5184154‑M2/8‑50 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:4319924‑M2/43‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:4614021‑M2/8‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:1952057‑M2/7‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:3585412‑M2/7‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 1:5453959‑M2/45‑1 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 1:776160‑M2/6‑50 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:2289247‑M2/46‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:2327186‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:2093150‑M2/47‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:4781035‑M2/47‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:2165506‑M2/48‑1 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:2692834/1‑49 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:3500256/1‑49 (MQ=255) | GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080544‑2080640 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |