| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 79 [0] | [0] 77 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 76 (1.050) | 58/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCG > NC_000913/2509581‑2509678 | tttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:3897967/1‑50 (MQ=255)tttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:3344439/1‑50 (MQ=255) ttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:2465626/1‑49 (MQ=255) tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAc < 1:2592818‑M1/49‑2 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg > 1:5272168‑M1/1‑46 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:1401592‑M1/49‑4 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg > 1:3587513‑M1/1‑44 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg > 1:2091695‑M1/1‑44 (MQ=255) gCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg < 1:2060445‑M1/50‑8 (MQ=255) gCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 1:41413‑M1/1‑43 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggc < 1:1127568‑M1/50‑9 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 1:3465544‑M1/1‑42 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 1:1452019‑M1/1‑41 (MQ=255) gggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 1:3533082‑M1/1‑40 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac < 1:1321591‑M1/49‑11 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca < 1:3039462‑M1/48‑10 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact > 1:3197174‑M1/1‑38 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa < 1:4870063‑M1/50‑14 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa < 1:2605167‑M1/50‑14 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 1:3537975‑M1/1‑36 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac < 1:2840438‑M1/50‑15 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc > 1:422979‑M1/1‑35 (MQ=255) aCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaaccc < 1:756771‑M1/50‑17 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg < 1:4788683‑M1/50‑18 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:629898‑M1/1‑33 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:796928‑M1/1‑33 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:3382802‑M1/1‑33 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac > 1:3114378‑M1/1‑30 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:4690008‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:1013576‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccgga < 1:4122832‑M1/49‑20 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccgg < 1:774148‑M1/48‑19 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:2593981‑M1/1‑29 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg < 1:3080505‑M1/50‑22 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg < 1:4926200‑M1/50‑22 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgt < 1:5286237‑M1/50‑23 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:2182192‑M1/1‑28 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:4229404‑M1/49‑24 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:5527136‑M1/49‑24 (MQ=255) cTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtaga > 1:912553‑M1/1‑25 (MQ=255) tGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagac > 1:2117812‑M1/1‑24 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 1:1223996‑M1/1‑23 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg < 1:3157052‑M1/50‑29 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg < 1:837364‑M1/50‑29 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg < 1:2531002‑M1/50‑29 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg > 1:3970377‑M1/1‑22 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact < 1:260617‑M1/49‑28 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact < 1:2318976‑M1/49‑28 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagac < 1:4525337‑M1/48‑27 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtag < 1:3711290‑M1/46‑25 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaaccaggacgtag < 1:1989681‑M1/46‑25 (MQ=255) ccccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgt < 1:599832‑M1/50‑30 (MQ=255) ccccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg > 1:4064310‑M1/1‑21 (MQ=255) ccccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg > 1:2953527‑M1/1‑21 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat < 1:1112549‑M1/50‑32 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:5280716‑M1/1‑19 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:3729834‑M1/50‑34 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:4392123‑M1/1‑17 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac > 1:1690111‑M1/1‑15 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa < 1:1118229‑M1/50‑37 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaa < 1:1732115‑M1/50‑39 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaaa < 1:5373403‑M1/49‑38 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 1:5148144‑M1/1‑10 (MQ=255) aaTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcg > 1:2967494‑M1/1‑9 (MQ=255) aaTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcg < 1:1271844‑M1/50‑42 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg < 1:5265518‑M1/50‑43 (MQ=255) tAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg > 1:2955822‑M1/1‑7 (MQ=255) aGAACAcaggcggcactaacccggacgtagactgtattacaaaagcggc > 1:2571582‑M1/1‑6 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca > 1:3065663‑M1/1‑5 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca > 1:3298339‑M1/1‑5 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca > 1:856413‑M1/1‑5 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaaa < 1:771155‑M1/50‑47 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaa > 1:3800901‑M1/1‑4 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaa > 1:3656066‑M1/1‑4 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:1444976‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:4676990‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:4281092‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:2871322‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaa > 1:199516‑M1/1‑2 (MQ=255) | TTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCG > NC_000913/2509581‑2509678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |