| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 88 [0] | [0] 85 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 81 (1.460) | 50/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:4266709/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1435079/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1538663/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:1442223/49‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:4220923/49‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:2176132/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:3605347/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:568925/49‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1065929/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:4176115/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1182837/1‑50 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:1500253/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:2721143/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:4077803/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAGTGA < 1:4077776/50‑1 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1886840/1‑50 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:437299/49‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:1470810/49‑1 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:1320185/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:2044092/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1046902/49‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:3993314/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1082988/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:1049772/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:426104/1‑50 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:2030615/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:3377473/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:101256/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:2312594/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:4341714/46‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:323977/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:1635671/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:3116361/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:1180101/1‑50 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:519195/1‑50 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:2942005/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:3641091/1‑49 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:3456496/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:681576/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:3114443/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:2544517/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:1090150/50‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:3170853/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:16500/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:375801/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:2818855/1‑49 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:3783926/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:4091030/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:4150928/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:3145494/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:2774872/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:2710580/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3281681/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:4082492/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:3085532/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3645262/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:911969/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:1679837/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:75873/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:2775064/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:1996383/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:2471425/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:2245549/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:4034345/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:3365047/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:2798253/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:1192870/50‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:3387452/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:2094554/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:2633051/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:142299/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:3884841/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2508889/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:634210/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:6405/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:4314740/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:1021317/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:2282100/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3908181/1‑47 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:670630/1‑47 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3416626/1‑47 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:2286550/50‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:1268854/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:1181390/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:157218/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:2094791/1‑49 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:2873457/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:2289993/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:3749770/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:3344749/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:2477244/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |