| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 84 [0] | [0] 83 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 83 (1.430) | 62/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:4087859/1‑50 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:449973‑M1/1‑49 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:416573‑M1/1‑49 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:3667266‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATTTCATTTTCAAGGAGCCGACcg > 1:2635591‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:830012‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 1:2682080‑M1/48‑2 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga > 1:3180653‑M1/1‑46 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga < 1:924332‑M1/49‑4 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga < 1:670359‑M1/49‑4 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga > 1:1756386‑M1/1‑46 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:3848654‑M1/1‑44 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:1941354‑M1/1‑43 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:458952‑M1/1‑43 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:2397691‑M1/1‑42 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:2752136‑M1/50‑10 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:1654653‑M1/1‑41 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt > 1:2179940‑M1/1‑40 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:2446419‑M1/50‑11 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:1179412‑M1/1‑39 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg < 1:2982875‑M1/50‑13 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg < 1:1960202‑M1/50‑13 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg < 1:3094615‑M1/50‑13 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:1112113‑M1/1‑38 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:3773326‑M1/49‑12 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:2258367‑M1/49‑12 (MQ=255) tGAAATACAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:2943916‑M1/49‑12 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:3605766‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:2836248‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:4343237‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:2024849‑M1/50‑15 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg > 1:3731288‑M1/1‑35 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg < 1:158995‑M1/50‑16 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:1477675‑M1/50‑17 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:2289136‑M1/1‑33 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:145766‑M1/50‑18 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:3208400‑M1/1‑33 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:3547331‑M1/1‑31 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct < 1:3239164‑M1/50‑20 (MQ=255) aTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:746325‑M1/1‑29 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:188093‑M1/50‑23 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:986899‑M1/1‑27 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:1026407‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:1592351‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:2203484‑M1/1‑26 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:2228127‑M1/1‑25 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:3231541‑M1/49‑26 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:719920‑M1/49‑26 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:3005929‑M1/1‑23 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:4161692‑M1/1‑23 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:2125459‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta < 1:4228315‑M1/49‑28 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt < 1:2719505‑M1/50‑30 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:2538514‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct > 1:589652‑M1/1‑19 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:991124‑M1/1‑18 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg < 1:3695692‑M1/50‑34 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg < 1:1046870‑M1/50‑34 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:2252281‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:2357463‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:97893‑M1/49‑33 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:665821‑M1/1‑16 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg > 1:3528404‑M1/1‑15 (MQ=255) tttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg > 1:2718918‑M1/1‑15 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:2988399‑M1/1‑13 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:3586635‑M1/49‑37 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:3779077‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:173008‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcg < 1:1425524‑M1/49‑38 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:2220456‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga < 1:2847115‑M1/49‑39 (MQ=255) gCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc > 1:508346‑M1/1‑6 (MQ=255) gCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc < 1:2143338‑M1/50‑45 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccc < 1:1449611‑M1/50‑46 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccc < 1:3497702‑M1/50‑46 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc > 1:3257833‑M1/1‑5 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc > 1:344408‑M1/1‑5 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:509336‑M1/1‑4 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat > 1:2205021‑M1/1‑3 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:3515549‑M1/50‑48 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:1556803‑M1/50‑48 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc > 1:2489954‑M1/1‑2 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg > 1:3718059‑M1/1‑1 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:3115145‑M1/50‑50 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |