| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 124 [0] | [0] 123 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 120 (1.510) | 61/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 120 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:1147767/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:2262658/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:2455896/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:1473910/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:2732134/50‑1 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:3502852/1‑50 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:3313997/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:3647247/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:5119905/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:4107173/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:5909833/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:5660995/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:5190681/50‑1 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:5440408/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:2414014/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:298268/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:3938193/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:3658190/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:1942611/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:6028832/49‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1116179/50‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:1066883/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:3118051/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:692506/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:779938/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:2006789/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:1157809/49‑1 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:4450100/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:406906/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATCCCATTCCATATAA < 1:555702/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACGATTCCATATA < 1:4896784/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:3137443/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:2289342/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:2970897/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:4034276/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3819159/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4092478/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3096982/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:2054681/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:419416/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:5333062/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:5419807/49‑1 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:4220739/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:831951/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:1094833/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:1787175/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:2761453/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:5042493/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:2420080/50‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:3615073/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:3833177/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:3538408/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG > 1:4845157/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:3417337/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:1706404/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:327644/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:3031496/49‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:4483082/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC < 1:4598313/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:3119935/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:3960797/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:202306/50‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:3926203/49‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:4431472/1‑49 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:758297/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:4738857/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:642253/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:5878798/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:5234449/1‑50 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:571774/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:4189487/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:1454036/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3232446/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:2944865/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGG < 1:4342699/49‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:4358966/48‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:3746733/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:3897558/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:4535692/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:2554117/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:4999179/1‑48 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:5599473/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:208393/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:1353542/1‑50 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 1:4309996/1‑50 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT < 1:5680736/50‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:1510223/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:2040480/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:2145196/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:1830402/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:5195652/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:3347986/1‑49 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:4171181/50‑1 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:2560734/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:2736471/49‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:289528/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:3709722/50‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:31200/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:1462709/49‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:4037206/1‑50 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |