| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 148 [0] | [0] 149 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 145 (1.830) | 68/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 145 total aligned reads displayed.
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:4180858/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:5870/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:2485217/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:2103627/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:857586/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:5689549/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:3477340/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:3656361/49‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:2473678/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:2396546/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:3586882/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:3816088/50‑1 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:1014106/1‑50 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:2521404/1‑50 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:5555984/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:3957880/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:1334447/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:1992043/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:1862505/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:2830846/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:196597/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:3179889/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:4084175/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:557204/1‑50 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:5735652/1‑50 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:5446858/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:3666221/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:1026450/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:1470795/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:1892944/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:5458264/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:5705917/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:1924508/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:1286638/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:3972137/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:4130321/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:3159475/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:5198494/50‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:2882495/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:4592436/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:4691041/50‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:4728648/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:4748299/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:113449/1‑50 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:1202041/1‑49 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:5506640/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:3951757/50‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:5293089/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:5928838/1‑49 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:452179/1‑49 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:3051175/1‑49 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:730882/1‑49 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:5319856/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:964549/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:116829/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:546031/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:3201805/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:3725032/1‑49 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:2941822/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:2751005/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:1029709/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:4459581/49‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:642238/1‑49 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:3171756/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:396085/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:5028469/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:802611/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:1470440/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:4009367/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:1723435/49‑1 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:1308727/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 1:3609883/50‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA < 1:3707152/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA < 1:4235380/49‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:1033582/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:1815237/50‑1 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:3265643/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:376117/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:1798284/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:330999/50‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:3038284/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:2860912/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:3947180/1‑50 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:127806/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:825833/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:2666719/1‑50 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:4854315/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:2525819/50‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:3928878/1‑50 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:4670726/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:3163974/49‑1 TTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC > 1:4917125/1‑49 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:3833168/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:3393998/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT > 1:3064790/1‑50 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:3790054/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:1419919/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:1611149/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:4110098/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:5296729/1‑50 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |