| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 765,208 | Δ5,405 bp | [mngR]–mngB | [mngR], mngA, mngB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 765208 | 770612 | 5405 | 117 [0] | [0] 113 | [mngR]–mngB | [mngR],mngA,mngB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 765207 | 0 (0.000) | 110 (1.410) | 53/96 | 0.0 | 100% | coding (669/723 nt) | mngR | DNA‑binding transcriptional repressor MngR |
| ? | NC_000913 | 770613 = | 0 (0.000) | intergenic (+2/‑845) | mngB/cydA | alpha‑mannosidase/cytochrome bd‑I ubiquinol oxidase subunit I | |||||
Only 100 of 117 total aligned reads displayed.
CGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/765157‑765207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > NC_000913/770613‑770661 CGCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:4660581/1‑50 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAT < 1:883328/50‑1 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:32351/1‑49 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:4605765/1‑49 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:2968889/1‑49 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA < 1:229770/49‑1 CGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:2080138/1‑48 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAa > 1:2258883/1‑49 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:754967/1‑50 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:1565412/1‑49 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:2580827/1‑49 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:3291600/1‑49 TGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCA < 1:387069/50‑1 TGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCA < 1:2046577/50‑1 TGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGC > 1:4789280/1‑49 GATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAA > 1:4255451/1‑50 GATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAA > 1:1351175/1‑50 ATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAAT > 1:2066535/1‑50 ATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAAT > 1:4457352/1‑50 ATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAAT > 1:2590446/1‑50 ATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAA < 1:1017624/49‑1 TTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAAT > 1:5718087/1‑49 TTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATC > 1:5980299/1‑49 TTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCA < 1:4187520/49‑1 TTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCA < 1:4144383/49‑1 TCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAA < 1:1896242/49‑1 TCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAA < 1:4661085/49‑1 CGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAAC > 1:3818744/1‑50 CGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAA < 1:2477272/49‑1 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC < 1:3117133/50‑1 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC > 1:3774059/1‑50 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAAC < 1:4522198/49‑1 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAAC < 1:140346/49‑1 CTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG < 1:1513021/50‑1 CTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG < 1:2397157/50‑1 CTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC > 1:2919360/1‑49 CTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC > 1:2019223/1‑49 TGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG > 1:796447/1‑49 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAG > 1:2575734/1‑50 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAG < 1:4765940/50‑1 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAG > 1:299020/1‑50 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAG > 1:1174030/1‑50 GCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGC > 1:1190787/1‑50 CTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGC > 1:3857605/1‑49 CTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGC > 1:1097518/1‑49 TATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:1392268/1‑50 TATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:1791781/1‑50 ATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:2972557/1‑49 ATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:3798123/1‑49 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA < 1:2526471/50‑1 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA > 1:4315328/1‑50 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCAC < 1:3824402/49‑1 CAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA > 1:2061243/1‑49 CAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA > 1:405906/1‑49 CAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA > 1:2970781/1‑49 AGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATA > 1:4124585/1‑50 GGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATAT > 1:3627550/1‑50 GGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATAT > 1:4831094/1‑50 GGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATAT < 1:4123249/50‑1 GGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATG > 1:4771856/1‑50 GGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATG > 1:1753423/1‑50 GTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGC < 1:4981045/50‑1 GTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGC > 1:34635/1‑50 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCG < 1:3983377/48‑1 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCG < 1:5694180/48‑1 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGC < 1:4515679/47‑1 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGC < 1:1876154/47‑1 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG > 1:5770903/2‑50 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG < 1:6011084/49‑1 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG > 1:4693844/2‑50 TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:5057757/1‑50 ATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:1352175/1‑48 ATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:5615391/1‑48 ATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:3578080/1‑48 AGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGc > 1:1991682/1‑49 AGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:1829792/1‑46 AGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:1616204/1‑46 TCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATT > 1:4641986/1‑50 TCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATT < 1:181377/50‑1 CATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTG > 1:4525028/1‑50 CATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTG > 1:2262242/1‑50 CATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTG > 1:501214/1‑50 ATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGT > 1:535732/1‑50 ATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGT > 1:3055678/1‑50 TCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTT < 1:2341206/50‑1 TCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTT < 1:5629042/50‑1 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA < 1:4630842/50‑1 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA < 1:5776671/50‑1 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA < 1:3186098/50‑1 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTG < 1:4943054/49‑1 GTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA > 1:2628579/1‑49 GTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA > 1:2939977/1‑49 TATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGAC > 1:5027322/1‑49 ATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACA > 1:3386838/1‑49 TTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAA < 1:1574738/50‑1 TTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAA < 1:77542/50‑1 TTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACA > 1:2431164/1‑48 TTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACA > 1:3524249/1‑48 TTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACA > 1:744263/1‑48 ATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > 1:3295821/1‑50 CGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/765157‑765207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > NC_000913/770613‑770661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |