| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 86 [0] | [0] 85 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 84 (1.060) | 54/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:843592/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:2122755/50‑1 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:4009610/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 1:3352556/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTG < 1:3609212/49‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:3662173/50‑1 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:2423747/1‑50 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGGCCG > 1:650028/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGA < 1:5565746/50‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:3917476/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:3857452/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:4549431/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:1643473/49‑1 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:5471423/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:1849817/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:4649907/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:3040080/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:1659208/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:1635112/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:3580915/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:1128805/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:2848363/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:657069/50‑1 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:5091165/1‑50 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:3464067/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:4770116/49‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:2409042/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGG < 1:5718284/50‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 1:1314636/49‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:1794462/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:1635274/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC < 1:3865953/49‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:5030870/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:5025761/1‑49 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:1412669/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCAC < 1:596197/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:3359027/1‑49 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:3920012/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT < 1:2930508/49‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT < 1:2413616/49‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT < 1:5683099/49‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:4947472/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:5821213/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:2026243/50‑1 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 1:1224552/50‑1 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 1:2490501/50‑1 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA > 1:2166346/1‑50 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:5369479/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA < 1:5229520/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA < 1:3867570/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:4928919/1‑50 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:129744/1‑49 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA > 1:3598024/1‑50 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:3899773/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:4713316/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:3647531/1‑50 CCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC > 1:2215374/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:4707874/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:3305652/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:628625/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:4067102/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:2875669/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:628730/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:3288264/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:4985850/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:2025703/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:4426255/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:5148809/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:321369/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 1:5580259/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:2365507/1‑50 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:3330940/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:4197539/1‑50 ttGATTATTTCCCTAATTCGGACCACATTCACATCATTTCTTACGCGCG > 1:3284187/3‑49 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 1:956570/50‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA < 1:5096202/49‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA < 1:751024/49‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT > 1:5787009/1‑50 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:3377941/1‑50 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:4363615/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:1427850/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:1292466/1‑50 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:4827316/1‑48 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:3331450/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |