| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 119 [0] | [0] 116 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 114 (1.440) | 63/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
Only 100 of 114 total aligned reads displayed.
ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466498‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAG < 1:2541284/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 1:1461247/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:3882090/1‑48 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:4290416/1‑48 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG < 1:2482501/50‑1 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG > 1:1534237/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:1016790/1‑50 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:5060127/1‑49 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:3797300/1‑49 GTAAAAAGTGGACAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:4416058/1‑49 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:5470315/1‑50 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:5919808/1‑50 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:804896/1‑49 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:3028078/1‑49 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4093310/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:27625/1‑50 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4891610/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:5856672/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:2406009/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1531443/1‑49 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACA < 1:4036348/50‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:844894/1‑48 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG < 1:5687815/50‑1 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC > 1:1259996/1‑50 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC > 1:1468240/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:4819344/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:3113996/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:2403280/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:4875536/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:2623315/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA < 1:2196463/50‑1 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:3777124/1‑50 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:518661/1‑50 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:1940022/1‑50 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:5093193/1‑50 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:5057469/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:3141612/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:779516/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA < 1:5309756/49‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA < 1:2921625/49‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA < 1:1857611/49‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT > 1:603146/1‑50 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT > 1:5429219/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:4164754/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 1:3183997/50‑1 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 1:5026963/50‑1 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 1:1923962/50‑1 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCG < 1:3377341/50‑1 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCG < 1:1721949/50‑1 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:4687307/1‑49 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:2081672/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:73810/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:1802415/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:2590601/1‑50 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATG < 1:2163634/50‑1 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:5564582/1‑49 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3307381/1‑49 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3478547/1‑48 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:2698224/1‑48 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG < 1:4101623/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:3339065/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:2540074/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:5478536/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT < 1:5693682/50‑1 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:872327/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT < 1:5371600/50‑1 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 1:3533094/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:829936/50‑1 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:1145355/1‑48 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:399009/1‑48 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:4373335/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG < 1:4269197/50‑1 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:1829784/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG < 1:2136015/50‑1 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:236836/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:3506038/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:3508511/1‑50 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT < 1:1812640/50‑1 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT > 1:3681747/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:872573/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:12932/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:3912106/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 1:5434224/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 1:5225519/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 1:4161880/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:469247/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC < 1:3267212/49‑1 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC < 1:599453/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:4798551/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT < 1:2271123/49‑1 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT > 1:4372949/1‑49 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA > 1:5420907/1‑49 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:4106658/50‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:3783735/50‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA < 1:3311790/49‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA > 1:508363/1‑49 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 1:5891210/50‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:3111876/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:1878145/1‑50 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:3103417/50‑1 ACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466498‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |