| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 171 [0] | [0] 169 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 149 (1.960) | 73/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 174 total aligned reads displayed.
ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:1472251/1‑50 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:4238438/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1719428/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:3284223/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:3843133/49‑1 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:282103/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:2794199/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:937288/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:5564554/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:2551073/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:1037312/50‑1 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5870410/1‑50 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:5459027/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1785326/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5271750/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:2505324/1‑49 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATaa < 1:3386562/49‑3 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:5318396/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:5606598/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:4037610/1‑49 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:5776276/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:5814694/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:5750802/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:5179865/50‑1 TCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:60101/1‑49 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:5238928/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:3081088/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:5318861/47‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:197601/1‑49 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2545364/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:4647736/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:4675784/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:5680701/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:4713899/1‑49 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:4919814/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:977577/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:2013934/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:2445959/50‑1 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:1885797/1‑50 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:2629614/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:3153052/49‑1 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:5087397/49‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:4020934/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:683787/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:5649684/1‑50 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:2029898/1‑50 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:2196246/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:3246232/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:5495901/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:2234271/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:3289912/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:2893067/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:4754603/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATAATT < 1:1356330/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:585723/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:4588983/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:2774364/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:5182153/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:4005392/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:115560/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:1319773/1‑49 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:4371576/50‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:1609397/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:1194012/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:4775322/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:1027196/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:3989395/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:5404692/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:152290/49‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:954922/1‑50 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATAATTGAATAAAAA < 1:1046319/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:4820699/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4966084/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3643055/1‑49 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:6025023/1‑49 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:896695/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:3425444/49‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3361595/1‑46 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:4637439/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:1555851/1‑50 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:3797317/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:1112552/50‑1 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:638343/1‑49 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:5963842/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 1:3571225/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:4521514/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:2454023/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:4913439/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:5802737/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:5427170/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:2979952/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:778595/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:2680900/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:1165257/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:3318344/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:4865055/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:1973516/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:4414795/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:5419419/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:1772605/49‑1 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |