| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 123 [0] | [0] 118 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 114 (1.500) | 62/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 123 total aligned reads displayed.
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTC > NC_000913/729315‑729411 | aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:961979‑M1/1‑50 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:847608‑M1/1‑50 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:193877‑M1/50‑1 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:113238‑M1/1‑50 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:1201065‑M1/1‑50 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:1801358‑M1/50‑2 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:1991177‑M1/50‑2 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:1658029‑M1/50‑2 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 1:1514937‑M1/1‑49 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:4545786‑M1/50‑2 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc < 1:4618021‑M1/50‑2 (MQ=255) aaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAc > 1:5696585‑M1/1‑49 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:4687964‑M1/50‑5 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc < 1:2690120‑M1/50‑5 (MQ=255) ggCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtc > 1:2487734‑M1/1‑46 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtct < 1:3290490‑M1/50‑6 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtct < 1:1953531‑M1/50‑6 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta < 1:5899164‑M1/50‑7 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta < 1:796196‑M1/50‑7 (MQ=255) cAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta < 1:1026882‑M1/50‑7 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtcta > 1:1669605‑M1/1‑43 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:1738202‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:2602017‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:46034‑M1/1‑42 (MQ=255) aCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctaca > 1:3847‑M1/1‑42 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac < 1:3322432‑M1/50‑10 (MQ=255) cTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacac < 1:248265‑M1/50‑10 (MQ=255) tGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:2722532‑M1/1‑40 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:3215938‑M1/1‑39 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:2122777‑M1/1‑39 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:3006603‑M1/1‑39 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:4961884‑M1/1‑39 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta > 1:709864‑M1/1‑38 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:4733259‑M1/50‑13 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:1709583‑M1/50‑13 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactta < 1:4232915‑M1/50‑13 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact < 1:1282691‑M1/48‑11 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac > 1:1297561‑M1/1‑37 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac > 1:2167333‑M1/1‑37 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact < 1:5037060‑M1/49‑15 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttact < 1:5088317‑M1/49‑15 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc < 1:413521‑M1/50‑17 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc > 1:1079197‑M1/1‑34 (MQ=255) tttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcc > 1:2970798‑M1/1‑34 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 1:2830676‑M1/1‑33 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:4007890‑M1/1‑32 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:352926‑M1/1‑32 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt > 1:727978‑M1/1‑30 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactactgt < 1:3625912‑M1/49‑20 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta < 1:1044028‑M1/49‑21 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta < 1:1540604‑M1/49‑21 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta < 1:5563550‑M1/49‑21 (MQ=255) attgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgta < 1:1681365‑M1/49‑21 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:2968674‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaa > 1:4285367‑M1/1‑28 (MQ=255) ttgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaa < 1:3161283‑M1/49‑22 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 1:5244184‑M1/1‑26 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac < 1:5834210‑M1/49‑24 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac < 1:4492064‑M1/49‑24 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg < 1:111444‑M1/50‑26 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 1:2721936‑M1/1‑25 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc < 1:1654887‑M1/49‑25 (MQ=255) ttgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgc > 1:5901399‑M1/1‑24 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:1020474‑M1/1‑23 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:37182‑M1/1‑23 (MQ=255) tgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:2798383‑M1/1‑23 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:784113‑M1/1‑22 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct < 1:250740‑M1/49‑28 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:3117947‑M1/1‑21 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:1161590‑M1/1‑21 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:2357298‑M1/1‑21 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:403619‑M1/1‑20 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:5670811‑M1/1‑20 (MQ=255) tGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:4796654‑M1/1‑20 (MQ=255) gAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag > 1:4051249‑M1/1‑19 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagga < 1:3900107‑M1/50‑33 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:1739915‑M1/49‑32 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcagg < 1:2903496‑M1/49‑32 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag < 1:1310575‑M1/50‑34 (MQ=255) gTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggag > 1:3546418‑M1/1‑17 (MQ=255) ttttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagc < 1:5217200‑M1/50‑35 (MQ=255) ttGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:1963113‑M1/1‑14 (MQ=255) ttGAATACATTGAAcgtctacacttaatcctgtaaaccgctcaggagca < 1:453937‑M1/49‑36 (MQ=255) ttGAATACATTCAAcgtctacacttactcctataaaccgctcaggagca < 1:3954519‑M1/49‑36 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt < 1:2968901‑M1/49‑38 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:5200469‑M1/1‑12 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa > 1:2488201‑M1/1‑11 (MQ=255) aTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat < 1:4587234‑M1/50‑41 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:6008866‑M1/1‑9 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa < 1:1247419‑M1/50‑44 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaa < 1:595146‑M1/50‑44 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatga < 1:5387219‑M1/49‑43 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat < 1:1955535‑M1/50‑45 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:2254642‑M1/1‑6 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:2576430‑M1/1‑5 (MQ=255) ttGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:4814314‑M1/1‑5 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:2833806‑M1/1‑3 (MQ=255) gAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta > 1:717848‑M1/1‑3 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta < 1:870065‑M1/49‑48 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta < 1:4829929‑M1/49‑48 (MQ=255) | AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTC > NC_000913/729315‑729411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |