| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 113 [0] | [0] 114 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 113 (1.420) | 62/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 114 total aligned reads displayed.
TCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683323‑683419 | tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt > 1:4553235‑M2/49‑50 (MQ=255)tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:2538667‑M2/2‑1 (MQ=255)tctgatttcgcacagcaataaagagaatatgggccgaatgaaattcccAt < 1:1430267‑M2/2‑1 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:2160524‑M2/46‑50 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:4357543‑M2/46‑50 (MQ=255) gatttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:1872204‑M2/46‑50 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATg < 1:913430‑M2/3‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc < 1:4412478‑M2/5‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGc > 1:2252518‑M2/45‑49 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:4449438‑M2/6‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:3875206‑M2/6‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:5571919‑M2/6‑1 (MQ=255) atttcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCg < 1:6016115‑M2/6‑1 (MQ=255) tcgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAg < 1:3603952‑M2/8‑1 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt > 1:2017284‑M2/41‑50 (MQ=255) cgcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGt < 1:1450864‑M2/9‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:1553245‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:1552095‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGtt < 1:3268869‑M2/10‑1 (MQ=255) gcacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTc > 1:3131770‑M2/40‑50 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt > 1:1489067‑M2/39‑50 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt > 1:5153926‑M2/39‑50 (MQ=255) cacagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCt < 1:5743989‑M2/12‑1 (MQ=255) acagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg < 1:3792864‑M2/13‑1 (MQ=255) acagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:2118543‑M2/38‑50 (MQ=255) acagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:875308‑M2/38‑50 (MQ=255) cagcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTg > 1:3262144‑M2/37‑49 (MQ=255) agcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCa > 1:4334499‑M2/36‑50 (MQ=255) agcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCa < 1:2734781‑M2/15‑1 (MQ=255) gcaataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 1:3794790‑M2/35‑50 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 1:2870647‑M2/17‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAtt < 1:2187130‑M2/17‑1 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 1:4545388‑M2/34‑49 (MQ=255) caataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCAt > 1:2541226‑M2/34‑49 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa > 1:1616661‑M2/33‑50 (MQ=255) aataaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTa > 1:802875‑M2/33‑50 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:5717400‑M2/31‑50 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc < 1:2942951‑M2/20‑1 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:848761‑M2/31‑50 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc < 1:3811376‑M2/20‑1 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc < 1:5321511‑M2/20‑1 (MQ=255) taaagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATc > 1:3573117‑M2/31‑50 (MQ=255) aagagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCa < 1:2905107‑M2/22‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 1:2459275‑M2/24‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 1:1668656‑M2/24‑1 (MQ=255) gagaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCAtt < 1:2642561‑M2/24‑1 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg > 1:5159722‑M2/26‑50 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg > 1:2444170‑M2/26‑50 (MQ=255) agaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTg > 1:2478262‑M2/26‑50 (MQ=255) gaatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGc < 1:2498423‑M2/26‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa > 1:5429868‑M2/24‑50 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa < 1:4373713‑M2/27‑1 (MQ=255) aatatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCa > 1:2335298‑M2/24‑50 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt > 1:5280923‑M2/23‑50 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt > 1:2506580‑M2/23‑50 (MQ=255) atatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAt > 1:2920938‑M2/23‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:2625321‑M2/22‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:1205081‑M2/22‑50 (MQ=255) tatgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:5987274‑M2/22‑50 (MQ=255) atgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAtt > 1:3860359‑M2/21‑49 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCAttt < 1:4072650‑M2/30‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta < 1:2212685‑M2/31‑1 (MQ=255) tgggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta > 1:1355327‑M2/20‑50 (MQ=255) gggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTta > 1:841341‑M2/19‑49 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata > 1:5175088‑M2/18‑50 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtata > 1:4914316‑M2/18‑50 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtat < 1:5094773‑M2/32‑1 (MQ=255) ggccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTtat < 1:2251131‑M2/32‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:1137204‑M2/35‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:4073540‑M2/35‑1 (MQ=255) ccgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATc < 1:3595180‑M2/35‑1 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt > 1:5810129‑M2/15‑50 (MQ=255) cgaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCt < 1:1242514‑M2/36‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt < 1:3314530‑M2/37‑1 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:725713‑M2/14‑50 (MQ=255) gaatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:4264304‑M2/14‑50 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCtt > 1:1047409‑M2/13‑49 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTg < 1:4990406‑M2/38‑1 (MQ=255) aatgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTg < 1:2708135‑M2/38‑1 (MQ=255) atgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga < 1:4966949‑M2/39‑1 (MQ=255) tgaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaa < 1:1553372‑M2/40‑1 (MQ=255) gaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:5955661‑M2/10‑48 (MQ=255) gaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:5254897‑M2/10‑48 (MQ=255) gaaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:1942424‑M2/10‑48 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:3702847‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:3812170‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaag < 1:2043456‑M2/42‑1 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:4768024‑M2/9‑47 (MQ=255) aaattcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTga > 1:1371999‑M2/9‑47 (MQ=255) attcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaaga > 1:446317‑M2/7‑49 (MQ=255) ttcccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa < 1:1256881‑M2/45‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTgaaagaaa > 1:3655749‑M2/3‑47 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa < 1:3764084‑M2/47‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa < 1:2006058‑M2/47‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa < 1:3224135‑M2/47‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAag < 1:4942761‑M2/48‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAag < 1:3227878‑M2/48‑1 (MQ=255) ccATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAag < 1:1172811‑M2/48‑1 (MQ=255) cATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAagaaaaaag < 1:3253919‑M2/49‑3 (MQ=255) aTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGaaaaa > 1:3903815/1‑47 (MQ=255) | TCTTTCCAGACGGCAATTAAACTATTGGTAGTACCGAGATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683323‑683419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |