| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 107 (1.350) | 65/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
Only 100 of 108 total aligned reads displayed.
GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 | cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:5561065‑M2/50‑50 (MQ=255)cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1791648‑M2/50‑50 (MQ=255)cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:731427‑M2/50‑50 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg < 1:2955228‑M2/1‑1 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:707236‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg < 1:4894105‑M2/1‑1 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:2599751‑M2/2‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:217784‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:5773427‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:5523094‑M2/3‑1 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:2337155‑M2/47‑47 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:402365‑M2/47‑47 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg < 1:1242637‑M2/4‑1 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:2193448‑M2/46‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:4001244‑M2/45‑49 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:1030078‑M2/44‑50 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa < 1:5415255‑M2/7‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:4012539‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:1586361‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:3369629‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:624058‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc > 1:3638208‑M2/43‑50 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt < 1:193156‑M2/9‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:4021161‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:1453076‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:3465981‑M2/11‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:1956651‑M2/13‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:235156‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:675291‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:5567817‑M2/16‑1 (MQ=255) tttcttcgccatttagggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1540561‑M2/34‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:5028201‑M2/34‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:4973037‑M2/17‑1 (MQ=255) tttcttcgccatttaaggcgttatacccagtttGCAGAAACTCCGTAAt > 1:2986816‑M2/34‑49 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:2223332‑M2/33‑48 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:3229617‑M2/33‑48 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1267089‑M2/33‑48 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:1315112‑M2/18‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:4219016‑M2/18‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:5958316‑M2/18‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:5059063‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:4520288‑M2/19‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:3451090‑M2/19‑1 (MQ=255) ttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:407521‑M2/30‑50 (MQ=255) ttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:55748‑M2/30‑50 (MQ=255) tcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:2950460‑M2/29‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:4496385‑M2/22‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:688143‑M2/22‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa < 1:5478778‑M2/24‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:2221857‑M2/23‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa > 1:2496504‑M2/27‑49 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:2264268‑M2/25‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:737538‑M2/25‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:788772‑M2/26‑49 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:628101‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2276659‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2123807‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2095908‑M2/26‑1 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:2046445‑M2/24‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:5346794‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 1:5221425‑M2/23‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 1:1645498‑M2/23‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 1:5190827‑M2/23‑50 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:3796038‑M2/22‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:2441129‑M2/29‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:2139649‑M2/20‑50 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:3314654‑M2/31‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:32304‑M2/19‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:2579561‑M2/19‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:5165048‑M2/32‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:5559331‑M2/32‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 1:1254898‑M2/16‑49 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:3251895‑M2/35‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:5616915‑M2/15‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:5615485‑M2/14‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc < 1:5283465‑M2/37‑1 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:297829‑M2/38‑1 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:867193‑M2/38‑1 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:2318804‑M2/38‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:1818262‑M2/40‑1 (MQ=255) ccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt > 1:4432215‑M2/10‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:5767442‑M2/42‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:103544‑M2/42‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:2234888‑M2/9‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:479874‑M2/9‑50 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:2748314‑M2/8‑50 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:3538981‑M2/8‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:4889244‑M2/7‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 1:1138716‑M2/45‑1 (MQ=255) gtttGCAGTAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:1202575‑M2/46‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc > 1:3940495‑M2/5‑50 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc > 1:3910854‑M2/5‑50 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:5510379‑M2/46‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:555209‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg > 1:4226525‑M2/4‑50 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:4039108‑M2/48‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:3073074‑M2/48‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:1949024‑M2/48‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:1654609‑M2/48‑1 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:2081349/1‑49 (MQ=255) | GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |