| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 50 [0] | [0] 50 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 49 (0.950) | 35/98 | 0.1 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466499‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA > NC_000913/2476179‑2476225 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 1:3233547/50‑1CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 1:3463382/50‑1CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:3572943/1‑48CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:1021900/1‑48CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:1307861/1‑48 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:2269528/50‑1 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:1403668/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1586644/1‑49 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:2534791/1‑48 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1250374/1‑48 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:2508519/1‑48 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:1260009/1‑50 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG > 1:2635339/1‑50 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC > 1:1563263/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:1057103/1‑50 GATAAAATGATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:2829854/1‑49 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 1:2542550/49‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:2510605/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:3154156/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 1:3023431/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:2620823/1‑49 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 1:1472153/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:1701873/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:1938268/50‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT < 1:2379034/50‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT > 1:1870942/1‑50 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:1927551/1‑49 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:1114924/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:1752234/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:1514701/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA < 1:2840636/49‑1 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3769544/1‑48 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:3817221/1‑50 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG < 1:3315399/49‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC < 1:351361/49‑1 CCACCGGATTTTTACCCTAGAACCATACAGCCTCACACTCGATGAGGCCT < 1:220173/50‑1 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:2118769/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:2148986/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:3063648/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:320033/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:2525828/1‑50 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:2466863/50‑1 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:3854529/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:2306413/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:3491663/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:2588231/50‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:2541178/1‑49 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA < 1:2873811/49‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:845269/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466499‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA > NC_000913/2476179‑2476225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |