| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 66 [0] | [0] 64 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 63 (1.230) | 44/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > NC_000913/2614796‑2614843 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:3446170/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:1924101/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG < 1:556623/49‑1 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:2376645/1‑49 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA > 1:3661212/1‑49 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAA < 1:585599/49‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:141745/50‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG > 1:1676854/1‑50 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:3130671/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:2045945/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:1593738/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:3414543/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:1937841/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:822947/49‑1 GAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:302307/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:3693178/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:3669300/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:1198419/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:1314652/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT < 1:1549281/49‑1 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:1513940/1‑50 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:2233601/1‑50 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:1473146/1‑49 ATGTTTCTTATCCTTTTCAAGGAGCCGACCGAAACAGTACGTCGGGCTG > 1:1866855/1‑49 ATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:3245531/1‑49 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2216890/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2855604/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:3926434/1‑47 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:218864/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1325140/1‑46 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2069880/1‑50 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:34435/1‑49 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:442741/1‑50 ATATCATTTTCAAGGATCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:3944811/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:3791323/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:1401793/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:2419206/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT > 1:2018285/1‑50 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:3865872/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:298937/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:2870468/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:1391538/50‑1 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC > 1:3142806/1‑50 TTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGC > 1:1246843/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:421725/1‑50 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:576627/1‑49 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:613628/1‑49 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:658058/1‑50 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:2552066/1‑50 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCG < 1:1160429/49‑1 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:2424647/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:191541/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:1776151/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA < 1:204546/49‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:2892658/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG < 1:283094/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG < 1:606150/50‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC > 1:1731923/1‑50 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC < 1:2558584/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:182273/1‑49 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA > 1:1178071/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:3683943/1‑50 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC < 1:360188/50‑1 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > NC_000913/2614796‑2614843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |