| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 43 [0] | [0] 44 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 37 (0.750) | 28/94 | 0.2 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:559935/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:2397154/49‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:1696000/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:3475096/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:3260167/49‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:3248230/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:3769846/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:921054/50‑1 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:3574092/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:1029706/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:3207790/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:1487214/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1679604/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:983263/49‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:3163081/1‑48 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:2163267/1‑50 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:3477007/49‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:2392647/1‑49 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:2957835/1‑49 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:990718/1‑50 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:2792311/1‑50 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:2052767/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:421221/1‑50 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:2532880/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:1786995/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:568177/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:2782268/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:3759879/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:1577964/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:106588/50‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:1773942/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:1660558/50‑1 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3388168/1‑48 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:55514/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:3006134/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:1786048/50‑1 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 1:3931760/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1363270/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:2604249/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:66790/49‑1 ATATTTATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1635167/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAATATAGATTTTATG > 1:311144/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:84080/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:1255300/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:3284004/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |