| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 45 [0] | [0] 44 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 44 (0.860) | 34/98 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > NC_000913/3722076‑3722121 TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:806603/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:2547688/1‑50 ATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC > 1:1530556/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA < 1:116640/47‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:953512/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 1:836130/49‑1 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:3515911/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTG < 1:3176127/49‑1 gcGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 1:2108868/3‑49 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:2609888/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:3726411/2‑50 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:3771546/48‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:3621509/50‑1 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 1:812409/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:2269065/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:987437/50‑1 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:974283/50‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:528589/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 1:3305155/50‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG < 1:3661265/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:218391/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 1:3412158/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 1:3920467/50‑1 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 1:3880929/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG < 1:3911051/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:2014374/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT > 1:3794/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:2739812/49‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTT < 1:1907202/49‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 1:392072/48‑1 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT < 1:3073169/50‑1 TGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 1:1852139/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 1:1744736/50‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 1:3177092/50‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG > 1:1873767/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 1:492176/49‑1 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT < 1:338054/49‑1 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT < 1:2024011/49‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:3332116/1‑50 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC > 1:1554926/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:1757058/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:2863665/1‑50 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:3381484/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > 1:1231030/1‑50 TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > NC_000913/3722076‑3722121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |