| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 88 [0] | [0] 88 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 86 (1.480) | 56/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCG > NC_000913/167434‑167532 | ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:4077896/1‑50 (MQ=255)ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:1196243/1‑50 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:2632117‑M1/50‑2 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt > 1:3133389‑M1/1‑49 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:3806219‑M1/50‑2 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:1699518‑M1/50‑2 (MQ=255) aaTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt > 1:4421285‑M1/1‑48 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 1:3657047‑M1/50‑4 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:3286654‑M1/1‑47 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt < 1:4065300‑M1/49‑3 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcc < 1:1247218‑M1/50‑5 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:2946353‑M1/1‑46 (MQ=255) cATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:2797197‑M1/1‑45 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 1:2833939‑M1/50‑7 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 1:2112503‑M1/50‑7 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:1760616‑M1/1‑44 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:1293871‑M1/1‑44 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata < 1:487151‑M1/50‑8 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 1:1977743‑M1/1‑42 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 1:320241‑M1/1‑42 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat < 1:290576‑M1/49‑9 (MQ=255) tcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa > 1:2750086‑M1/1‑40 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 1:499282‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 1:764059‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 1:2919730‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:2756197‑M1/47‑10 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:4144374‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:3426013‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:1124148‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:1246043‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:1974038‑M1/1‑37 (MQ=255) ttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc > 1:2420353‑M1/1‑36 (MQ=255) ttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc > 1:1372120‑M1/1‑36 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc < 1:3115756‑M1/49‑16 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccct < 1:1075346‑M1/50‑18 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccct > 1:3327564‑M1/1‑33 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccct > 1:2665141‑M1/1‑33 (MQ=255) cGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccct > 1:1907514‑M1/1‑33 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:268435‑M1/1‑32 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:2447899‑M1/1‑31 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:3263420‑M1/1‑31 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:916993‑M1/1‑31 (MQ=255) tATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta > 1:898485‑M1/1‑30 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta < 1:938979‑M1/49‑21 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:649159‑M1/49‑22 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 1:2865991‑M1/1‑27 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:3285811‑M1/50‑26 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:3776723‑M1/1‑23 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg < 1:428098‑M1/49‑27 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:1499854‑M1/1‑21 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:526372‑M1/1‑21 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac < 1:3278272‑M1/50‑30 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:2433644‑M1/1‑21 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:2622235‑M1/1‑21 (MQ=255) ttACATCAGAGATATTCCAttccatataacggccctgtacgcctggacg > 1:2723134‑M1/1‑19 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:1081765‑M1/1‑18 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:3752122‑M1/1‑17 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:38509‑M1/1‑16 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:2693769‑M1/1‑16 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 1:3408867‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggata > 1:748380‑M1/1‑14 (MQ=255) cAGAGATATACCAttccatataacggccctgtacgcctggacggataaag > 1:1209689‑M1/1‑13 (MQ=255) cAGAGATATACCAttccatataacggccctgtacgcctggacggataaag > 1:150999‑M1/1‑13 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:569382‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaag < 1:3328043‑M1/49‑38 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:174626‑M1/1‑9 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt < 1:3893‑M1/50‑42 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 1:3293869‑M1/50‑43 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 1:148149‑M1/50‑43 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:2507065‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:2065908‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:458287‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:268136‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:2059928‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:1694753‑M1/1‑8 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:3493280‑M1/1‑8 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 1:2188568‑M1/50‑44 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 1:4424489‑M1/50‑44 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 1:833227‑M1/50‑44 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg < 1:2506346‑M1/50‑46 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg < 1:1969598‑M1/50‑46 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg > 1:524468‑M1/1‑5 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 1:3932032‑M1/49‑45 (MQ=255) aCCAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:569058‑M1/1‑4 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgcg < 1:293992‑M1/50‑48 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgcg < 1:3349746‑M1/50‑48 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:2060280‑M1/1‑3 (MQ=255) attccatataacggccctgtacgcctggacggataaagcgtttacgcgac < 1:3571790‑M1/50‑50 (MQ=255) | ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCG > NC_000913/167434‑167532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |