| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 53 (0.910) | 38/98 | 0.1 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 | cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1161317‑M2/50‑50 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:3550651‑M2/47‑47 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg < 1:922528‑M2/4‑1 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:3764051‑M2/46‑49 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa < 1:789913‑M2/5‑1 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:914999‑M2/44‑50 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:1382486‑M2/44‑50 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:1651411‑M2/44‑50 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:3789227‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:3051949‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:2515330‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:2147358‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc > 1:2146363‑M2/43‑50 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt < 1:3179066‑M2/9‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:1941991‑M2/40‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:1135364‑M2/10‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:1715119‑M2/10‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:2767592‑M2/39‑50 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt > 1:2194682‑M2/37‑49 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:4446092‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:155058‑M2/35‑50 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:3087619‑M2/17‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:1407028‑M2/17‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAATCTCCGTAATga < 1:2957537‑M2/18‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:2560012‑M2/32‑47 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:1236482‑M2/18‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:795933‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:745361‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:3302749‑M2/19‑1 (MQ=255) ttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:2134485‑M2/30‑50 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 1:636717‑M2/21‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:3829596‑M2/25‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2089405‑M2/25‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:3330161‑M2/24‑50 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:1283416‑M2/24‑50 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:1585880‑M2/24‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:1376324‑M2/28‑1 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:3902‑M2/21‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:1781339‑M2/21‑50 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:1217743‑M2/32‑1 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:1656656‑M2/18‑50 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa < 1:574401‑M2/33‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:467351‑M2/35‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:1949924‑M2/15‑50 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:4043276‑M2/15‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:1436345‑M2/14‑50 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:3498998‑M2/12‑49 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:2871372‑M2/40‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:2093030‑M2/40‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:1405211‑M2/43‑1 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 1:2363140‑M2/45‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:531021‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg > 1:1380176‑M2/4‑50 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc < 1:383857/49‑1 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc < 1:2614340/49‑1 (MQ=255) | GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |