| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 129 [0] | [0] 132 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 129 (1.150) | 64/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
Only 100 of 129 total aligned reads displayed.
GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871982‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > NC_000913/1873467‑1873514 tCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 1:5899631/49‑1GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 1:7591036/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:2487149/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG > 1:3602801/1‑50 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:5252137/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:4131023/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:7283640/50‑1 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:6557523/1‑50 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:5328945/1‑50 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGT < 1:4413065/50‑1 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:1604379/1‑49 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA < 1:8345696/50‑1 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:726214/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:7611742/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA < 1:6241851/50‑1 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA < 1:7751997/50‑1 TCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTAT > 1:494439/1‑49 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAA < 1:4254404/49‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA > 1:7467051/1‑48 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:4903655/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:3724724/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG < 1:288884/50‑1 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:1204928/1‑50 ACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGC > 1:390944/1‑50 ACTTTATCTGGTTTTCTCGTTTCACCAACCGAAGGAGATGCGTATAAAGC < 1:7005637/50‑1 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT > 1:5698710/1‑50 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT < 1:327317/50‑1 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT > 1:5120223/1‑50 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT < 1:6887025/48‑1 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT < 1:6511949/48‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:5538505/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:596996/49‑1 CTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 1:6741259/1‑50 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG < 1:6768550/50‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG < 1:3012917/50‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG > 1:72111/1‑50 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 1:4193322/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATG < 1:7281994/48‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 1:7859733/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA < 1:1776682/46‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA < 1:4002250/46‑1 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC < 1:7423117/50‑1 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC < 1:2122785/50‑1 TTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG > 1:6006228/1‑50 TTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG > 1:2498376/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG < 1:1943961/49‑1 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG < 1:8123554/49‑1 CTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGTGCGTT < 1:8418427/49‑1 CTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTT > 1:2114082/1‑49 CGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 1:1101028/1‑49 CGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 1:8371379/1‑49 CGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 1:3287049/1‑49 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA < 1:1301973/50‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 1:7992107/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTAT < 1:406736/49‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTAT < 1:2427009/49‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTAT < 1:8239042/49‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA < 1:1070285/48‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA < 1:3377051/48‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTT < 1:1574180/47‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT < 1:1980664/50‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT < 1:7354038/50‑1 TTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAcg > 1:5516579/1‑48 TTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG > 1:6057347/1‑50 TCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT > 1:1717938/1‑50 TCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT > 1:7869212/1‑50 CACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT < 1:5599148/49‑1 CACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT > 1:7627348/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:528789/49‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:5475458/49‑1 CTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:5530575/1‑50 CTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA < 1:4121539/50‑1 TAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:8555324/1‑49 TAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:1384768/1‑49 AACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT > 1:2178935/1‑49 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:3353849/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:3998552/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT < 1:1861907/48‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT < 1:2682093/48‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT > 1:2693907/1‑48 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG < 1:5593260/50‑1 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG < 1:8349617/50‑1 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG < 1:7989622/50‑1 CGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGC < 1:2677619/50‑1 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCA < 1:6872956/50‑1 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCA < 1:7939432/50‑1 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCA < 1:6805947/50‑1 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG < 1:2938543/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGA < 1:6025507/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGA < 1:1107325/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGA < 1:3556853/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGA < 1:5951211/50‑1 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA < 1:7600987/50‑1 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA < 1:6512844/50‑1 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA < 1:3010399/50‑1 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA < 1:2118002/50‑1 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA < 1:5871107/50‑1 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC > 1:4136545/1‑49 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC > 1:5202729/1‑49 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC > 1:1368104/1‑49 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871982‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > NC_000913/1873467‑1873514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |