| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 104 [0] | [0] 104 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 101 (0.890) | 60/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
Only 100 of 104 total aligned reads displayed.
AACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517902‑2517999 | tgcaagctgggcaaactaagtatctgaccccgcataaggaatagaacac < 1:4727335‑M2/1‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg > 1:2854286‑M2/47‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg > 1:1284491‑M2/47‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg < 1:6791770‑M2/4‑1 (MQ=255) aagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggc > 1:3690925‑M2/46‑50 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg > 1:681997‑M2/45‑50 (MQ=255) gctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg < 1:7704275‑M2/7‑1 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcggc < 1:2355691‑M2/8‑1 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 1:471054‑M2/43‑49 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 1:1824695‑M2/43‑49 (MQ=255) tgggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCa > 1:7725064‑M2/42‑50 (MQ=255) ggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt < 1:1995873‑M2/11‑1 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTa < 1:6222928‑M2/12‑1 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTa < 1:4210731‑M2/12‑1 (MQ=255) caaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa > 1:1480422‑M2/38‑50 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc < 1:6575087‑M2/14‑1 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc > 1:8216829‑M2/37‑50 (MQ=255) aactaagtatcttaccccgcataaggaatagaacaCAGGCGGCACTAAcc > 1:7597724‑M2/36‑50 (MQ=255) aactaagtatctggccccgcataaggaagagaacaCAGGCGGCACTAAcc < 1:3214933‑M2/15‑1 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc > 1:6753362‑M2/36‑50 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:2002093‑M2/15‑1 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:5114653‑M2/15‑1 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc > 1:8329454‑M2/36‑50 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:1104181‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:5324158‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:4873080‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:7879665‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:2339430‑M2/16‑1 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:2050139‑M2/34‑50 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:4255131‑M2/34‑50 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:2861649‑M2/33‑49 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:1876452‑M2/33‑49 (MQ=255) aagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGa > 1:731310‑M2/32‑50 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCgg < 1:3732329‑M2/18‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:6025274‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:4740935‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc > 1:3434031‑M2/31‑50 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:7590322‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:7493739‑M2/20‑1 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:4090722‑M2/27‑47 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTa < 1:2740838‑M2/23‑1 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa > 1:2558185‑M2/26‑50 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa > 1:1435470‑M2/26‑50 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa > 1:4487501‑M2/26‑50 (MQ=255) tgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGAc > 1:6428039‑M2/25‑50 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt > 1:1449301‑M2/24‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAg < 1:2636816‑M2/24‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAg < 1:3238646‑M2/24‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAg < 1:3879299‑M2/24‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa < 1:586487‑M2/25‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa < 1:5621504‑M2/25‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGAc < 1:456558‑M2/26‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt < 1:7012337‑M2/27‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:7125935‑M2/28‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:466252‑M2/28‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:1377397‑M2/23‑50 (MQ=255) ccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:3236440‑M2/22‑49 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:1425606‑M2/31‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:7832568‑M2/20‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:3121227‑M2/31‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:4883911‑M2/31‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:1463610‑M2/19‑49 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:1539118‑M2/18‑50 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:7568325‑M2/18‑50 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:1276235‑M2/17‑49 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:2602334‑M2/34‑1 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:7078188‑M2/34‑1 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc > 1:5726351‑M2/16‑49 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc > 1:2687389‑M2/16‑49 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 1:3785938‑M2/36‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 1:7202470‑M2/36‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 1:8129700‑M2/36‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACa > 1:2825239‑M2/15‑49 (MQ=255) aaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 1:549327‑M2/14‑49 (MQ=255) aaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 1:7574288‑M2/14‑49 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaaa < 1:2311008‑M2/37‑1 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 1:428604‑M2/13‑48 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg < 1:7361136‑M2/39‑1 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg < 1:708734‑M2/39‑1 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACATAAGc > 1:6642696‑M2/11‑50 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc > 1:7969965‑M2/11‑50 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc < 1:7211058‑M2/40‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg < 1:5004035‑M2/41‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg < 1:7914627‑M2/41‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg < 1:4379748‑M2/42‑1 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaa < 1:1033175‑M2/45‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa < 1:3826338‑M2/46‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa < 1:3397448‑M2/46‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaa > 1:3616709‑M2/5‑49 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaa > 1:4559005‑M2/5‑49 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaa < 1:7351148‑M2/47‑1 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaa < 1:7047256‑M2/47‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaaa < 1:8034288‑M2/48‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaaa < 1:5045207‑M2/48‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa > 1:3944700‑M2/3‑48 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa > 1:6223461‑M2/3‑48 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa > 1:5223635‑M2/3‑48 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg > 1:3301343/1‑49 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGc < 1:2769962/50‑1 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGc < 1:4686327/50‑1 (MQ=255) | AACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517902‑2517999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |