| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 149 [0] | [0] 149 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 143 (1.280) | 71/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 149 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 | gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:6575288‑M1/1‑49 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:2834076‑M1/1‑49 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:7568700‑M1/50‑2 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:7377068‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:1954032‑M1/1‑48 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat < 1:7875679‑M1/50‑3 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:1047573‑M1/1‑48 (MQ=255) tAATGATTATCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:1822587‑M1/1‑47 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:3391475‑M1/1‑47 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:328597‑M1/1‑47 (MQ=255) tAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:6565033‑M1/1‑47 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:7672027‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:5602193‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:2494352‑M1/49‑5 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc < 1:6263667‑M1/48‑4 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc < 1:6508791‑M1/48‑4 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:5803221‑M1/1‑44 (MQ=255) gATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:3581813‑M1/1‑43 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:4480248‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:3077545‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:1413425‑M1/1‑42 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:1383691‑M1/49‑8 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaat < 1:7050936‑M1/49‑8 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:5969155‑M1/50‑10 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:5527439‑M1/50‑10 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:7141993‑M1/1‑41 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca > 1:3693782‑M1/1‑39 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:7135556‑M1/49‑11 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 1:2735671‑M1/1‑38 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:6687461‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:2761623‑M1/49‑12 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaac < 1:7821215‑M1/50‑14 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 1:2570818‑M1/1‑37 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:6352374‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca < 1:3873199‑M1/50‑15 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:420339‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:7390711‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:6835128‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:558361‑M1/1‑34 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:3282895‑M1/1‑34 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:3457934‑M1/1‑34 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac > 1:3187018‑M1/1‑34 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta < 1:636306‑M1/50‑18 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact > 1:526863‑M1/1‑33 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta > 1:8020773‑M1/1‑32 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaa < 1:2019706‑M1/50‑20 (MQ=255) caACGCATAGCTTCACATAATTCTGGTGCATatctaatacatccactaa > 1:8024850‑M1/1‑31 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 1:1752202‑M1/1‑30 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa < 1:2234224‑M1/50‑21 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 1:2608195‑M1/1‑30 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 1:3135849‑M1/1‑30 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac > 1:2057670‑M1/1‑29 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:2921726‑M1/50‑22 (MQ=255) cGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacg < 1:4434564‑M1/50‑23 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg > 1:7517015‑M1/1‑27 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:8480625‑M1/50‑24 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:1086858‑M1/50‑24 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:3675436‑M1/50‑24 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg < 1:1011290‑M1/50‑24 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg < 1:8455219‑M1/50‑25 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg < 1:5026267‑M1/50‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:1299433‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:4993573‑M1/1‑25 (MQ=255) aGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca > 1:584641‑M1/1‑23 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:1642178‑M1/1‑22 (MQ=255) ttCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:892451‑M1/1‑20 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:2557248‑M1/1‑19 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:6288970‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:5786525‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:8082592‑M1/48‑31 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc > 1:6575824‑M1/1‑17 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc > 1:5012945‑M1/1‑16 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc < 1:8058177‑M1/50‑36 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc < 1:4027521‑M1/50‑36 (MQ=255) aaTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:607255‑M1/1‑13 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:1580678‑M1/1‑12 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:5236233‑M1/1‑11 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:5290981‑M1/1‑11 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:543280‑M1/1‑11 (MQ=255) tCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:5413504‑M1/1‑10 (MQ=255) tCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta > 1:26043‑M1/1‑10 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:3711906‑M1/1‑9 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:1329120‑M1/1‑9 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttat < 1:1845665‑M1/49‑41 (MQ=255) tGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:7347692‑M1/1‑8 (MQ=255) ggTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:6978429‑M1/1‑7 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatca < 1:7393623‑M1/50‑45 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatc < 1:2281243‑M1/49‑44 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:4647893‑M1/1‑6 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat < 1:6697498‑M1/48‑43 (MQ=255) ttATatctaatacaaacactaaaacgggccatcaggcccgttatatcagt > 1:2241912‑M1/1‑4 (MQ=255) ttATatctaatacaaacactaaaacgggccatcaggcccgttatatcagt > 1:4289487‑M1/1‑4 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:115196‑M1/1‑3 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc > 1:1037494‑M1/1‑2 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc > 1:5921726‑M1/1‑2 (MQ=255) atatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg < 1:952907‑M1/49‑48 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct > 1:6928500‑M1/1‑1 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct < 1:3032537‑M1/50‑50 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc < 1:7956969‑M1/49‑49 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgc < 1:3878009‑M1/49‑49 (MQ=255) | CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |