| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908–258676 | 258683 | 8–776 | 112 [0] | [0] 113 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 93 (1.020) | 52/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 128 total aligned reads displayed.
CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA > NC_000913/258684‑258731 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:4734841/1‑50CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT < 1:2065930/50‑1CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 1:3870332/1‑50 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 2:634162/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 2:2955171/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:4169531/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:332401/1‑49 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 2:2865890/50‑1 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 2:2600599/50‑1 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 2:1261698/50‑1 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG < 1:5330520/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 2:826841/1‑49 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 2:1643259/1‑48 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 2:1064050/1‑48 GATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAG > 2:2401661/1‑50 ATTGATCAAAAAATTTACCTCACTAGGCCCGTATATTCGTGAAGATAAGT < 1:2289545/50‑1 ATTGATCAAAAAATTTACCGCTCTAGGCCCGTATATTCGTGAAGGTAAGT < 2:4628520/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:1038142/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:1817694/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:2464672/50‑1 TGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:5233513/1‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:3590013/1‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC < 2:1354350/49‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 2:168305/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 2:3866973/1‑49 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA < 2:3442752/49‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 2:1737920/1‑49 ATCAAAAAAGTTACCGCACTAGGACCGTATATTCGTGAAGGTAAGTGCAA < 2:4881025/50‑1 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 2:5158923/1‑48 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAG < 1:4290231/49‑1 AAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATA < 1:565615/50‑1 AAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATA < 1:4712869/50‑1 AAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT > 2:151215/1‑49 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:2682436/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:1679427/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA > 2:566672/1‑50 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 2:4310921/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 2:768043/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:1837525/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 2:1400745/50‑1 ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC < 1:263554/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 2:2024939/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC > 2:3245024/1‑49 ACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 1:47264/1‑50 ACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 2:4441641/1‑50 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:4874693/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 2:3031286/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 2:1025886/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 2:3776670/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:3842667/49‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:1112428/50‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT > 1:252417/1‑50 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 1:4783899/1‑50 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 1:455270/50‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT > 2:3982657/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT > 2:422604/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT > 2:1592089/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT > 1:2972163/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:3410287/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGCGCAAAGATAATCGATTCCTTT > 2:1919027/1‑50 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:2458843/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGGGCAAAGATAAGCGATTCTTTTg < 2:2090974/50‑2 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:2243918/1‑50 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGA < 1:3628854/50‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:1965976/49‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 2:1464030/1‑50 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 2:185268/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 1:877560/1‑50 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 1:3908086/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 2:2786202/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 1:123733/50‑1 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT > 2:1278974/1‑50 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT > 2:4511487/1‑50 TATATTCGTGAAGGTAAGCGCAAAGATAATCGATTCTTTTTCGATTGTCT > 1:424581/1‑50 ATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG > 2:4404774/1‑50 ATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG > 2:3708953/1‑50 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:2398934/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:195583/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG < 2:517775/49‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 1:4054763/1‑50 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 2:607250/1‑50 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 2:5114912/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT > 2:3426489/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC < 2:2850245/49‑1 TCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG > 2:1014838/1‑50 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA > 1:2128732/1‑50 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCCGTA < 2:5345459/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT > 1:4171581/1‑50 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:4411085/50‑1 GAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG > 2:3238945/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC < 1:4198880/50‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC < 2:4332612/50‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:5066465/49‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG < 2:2219679/50‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG < 1:3770503/50‑1 AGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCG > 1:3621659/1‑50 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 2:2672476/50‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:3230137/1‑50 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 2:3401425/1‑50 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA < 2:340671/50‑1 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA > NC_000913/258684‑258731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |