| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 13 (0.120) | 147 (1.340) | 65/98 | 0.0 | 91.9% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 13 (0.120) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 160 total aligned reads displayed.
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165102‑2165199 | aggcaTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAt > 2:1146576/1‑50 (MQ=255)aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa > 1:5265550‑M1/1‑49 (MQ=255)aGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAa < 2:713737‑M1/50‑2 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCTCCTTTAGAat < 2:2308600‑M1/50‑3 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat < 2:1416581‑M1/50‑3 (MQ=255) ggCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAat > 2:758127‑M1/1‑48 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc > 1:4880472‑M1/1‑46 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc < 1:3443222‑M1/50‑5 (MQ=255) cATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcc > 1:3511980‑M1/1‑46 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct > 1:5067218‑M1/1‑45 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct > 1:2921165‑M1/1‑45 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct < 1:1855677‑M1/50‑6 (MQ=255) aTCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcct < 1:1149477‑M1/50‑6 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtc < 2:2601600‑M1/50‑9 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgt < 2:4873334‑M1/49‑8 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgt < 1:1052953‑M1/49‑8 (MQ=255) aGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGttt > 2:5239391/1‑50 (MQ=255) gAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGtttt < 1:1563380/50‑1 (MQ=255) aaaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgt < 2:2019545‑M1/50‑11 (MQ=255) aaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtt > 1:3988342‑M1/1‑39 (MQ=255) aaaTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtt < 2:936558‑M1/50‑12 (MQ=255) aaTCGCTCATGCTTTAGTCGGTAAACGGCTCCTTTAGAatcctgtcgttt < 2:2797198‑M1/50‑13 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttg < 2:3842613‑M1/50‑14 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttg < 2:4956215‑M1/50‑14 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttg < 1:1739601‑M1/50‑14 (MQ=255) aTCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGAt < 2:1373659/50‑1 (MQ=255) tCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgt > 1:4525482‑M1/1‑36 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:5342270‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:2399811‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttt < 1:1777352‑M1/50‑17 (MQ=255) gCTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtt < 2:3346751‑M1/49‑16 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgtttt < 1:5152058‑M1/50‑18 (MQ=255) cTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATacac < 1:1058548/50‑1 (MQ=255) tCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc > 1:3122382‑M1/1‑32 (MQ=255) tCATACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc > 1:2346102‑M1/1‑32 (MQ=255) tCATACTTTAATCGGCAAACAGCACCTTTAGAatcctgtcgtttgttttc > 2:3721484‑M1/1‑32 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcga < 2:3804710‑M1/50‑21 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcg < 2:672336‑M1/49‑20 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 2:2793838‑M1/48‑19 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 1:852626‑M1/48‑19 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 1:2647280‑M1/48‑19 (MQ=255) aTACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttc < 2:3978031‑M1/48‑19 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:2780707‑M1/50‑22 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 2:2348162‑M1/50‑22 (MQ=255) tACTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgat < 1:4881818‑M1/50‑22 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt < 1:3548043‑M1/50‑24 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt < 1:4239756‑M1/49‑23 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt < 1:2909953‑M1/49‑23 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatt < 1:618081‑M1/49‑23 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGAatcctgtcgcttgttttcgattt > 1:4334073‑M1/1‑27 (MQ=255) cTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATGtc < 2:1996520/50‑1 (MQ=255) tttAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt > 1:5050712‑M1/1‑26 (MQ=255) tttAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgattt > 1:1848913‑M1/1‑26 (MQ=255) tAATCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttca > 2:3139816‑M1/1‑24 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 2:3336490‑M1/49‑27 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 1:4414051‑M1/49‑27 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 2:2709931‑M1/49‑27 (MQ=255) aaTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaa < 2:1982502‑M1/49‑27 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 1:2137776‑M1/49‑28 (MQ=255) aTCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaa < 2:5266913‑M1/49‑28 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaat < 2:2898900‑M1/50‑30 (MQ=255) tCGGTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaat < 1:4277566‑M1/50‑30 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatat < 2:2133302‑M1/50‑32 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaata > 2:2024415‑M1/1‑19 (MQ=255) ggTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaata > 1:3296039‑M1/1‑19 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatata < 1:346451‑M1/50‑33 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatata < 1:4167229‑M1/50‑33 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatata < 2:2660038‑M1/50‑33 (MQ=255) gTAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatat > 2:1963923‑M1/1‑18 (MQ=255) tAAACAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataa < 1:2559478‑M1/50‑34 (MQ=255) aaaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat > 1:3081654‑M1/1‑16 (MQ=255) aaaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat > 1:2730769‑M1/1‑16 (MQ=255) aaaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat > 1:4583798‑M1/1‑16 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatg < 1:2138673‑M1/50‑36 (MQ=255) aaCAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataat > 2:3701027‑M1/1‑15 (MQ=255) aaCAGCACCTTTAGAatcctgtcgcttgttttcgatttcaaaatataatg < 2:4766680‑M1/50‑36 (MQ=255) cAGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaa < 1:954662‑M1/50‑38 (MQ=255) aGCACTTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaa < 2:765127‑M1/50‑39 (MQ=255) aGCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaa < 1:1110706‑M1/50‑39 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat > 2:1645293‑M1/1‑11 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat < 1:4333975‑M1/50‑40 (MQ=255) gCACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat < 2:1424667‑M1/50‑40 (MQ=255) gCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTa > 2:1742299/1‑50 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatt < 1:2691185‑M1/50‑41 (MQ=255) cACCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaat > 2:293891‑M1/1‑10 (MQ=255) aCCTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaatta < 2:1368969‑M1/50‑42 (MQ=255) aCCTTTAGAatcctgtcgtttgttatcgatttcaaaatataatgaaatta < 2:4577882‑M1/50‑42 (MQ=255) aCCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATg > 2:4098602/1‑50 (MQ=255) cTTTAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatt > 1:5051856‑M1/1‑7 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgt > 2:4121534‑M1/1‑4 (MQ=255) tAGAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttg < 2:3518596‑M1/49‑46 (MQ=255) aGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCtggt > 1:807201/1‑50 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt < 2:3491896‑M1/50‑49 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt < 1:4002116‑M1/50‑49 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgttt < 1:1911668‑M1/50‑49 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt < 2:4019847‑M1/49‑48 (MQ=255) gAatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtt < 1:2679339‑M1/49‑48 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt > 2:4369798‑M1/1‑1 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt < 2:5122019‑M1/50‑50 (MQ=255) aatcctgtcgtttgttttcgatttcaaaatataatgaaattatttgtttt > 1:3852441‑M1/1‑1 (MQ=255) | AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGATGCTGTTTTCGATACACAATTTCAATCAAGGAGTCATTATGGCTGGTTG > NC_000913/2165102‑2165199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |