| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 205 [0] | [0] 206 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 202 (1.730) | 85/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 202 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 2:4024900/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 2:1271210/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 2:2793889/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:4465492/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:3209342/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:4089144/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:691317/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:3309725/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:3265200/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:2529520/49‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1054412/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:3401797/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 2:2728612/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:2023513/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:4279201/1‑50 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:2505277/1‑49 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:245947/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 2:1434099/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 2:3376986/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 2:1235536/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 1:941222/1‑49 gCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 2:3495062/49‑1 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 2:689865/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:36067/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:2329113/1‑50 GTTTACGTTATCATTCGCTTTACATCAGAGATATACCATTCCATATA < 1:1569450/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 2:1171972/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 2:3739436/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 2:2050223/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 2:539941/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:2655172/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:714852/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 2:966740/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3021448/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAGCGG < 1:3836352/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 2:3402374/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 2:1856559/1‑50 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 2:3972776/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 2:160794/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:3523402/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 2:4302645/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 2:2212541/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:3496786/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 2:3731748/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 2:2691875/50‑1 GTTAGCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:2059895/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 2:2426765/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 2:3217723/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 2:1130099/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 2:4044367/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:2937746/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:1508032/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 2:1453004/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:1196144/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 2:3618307/49‑1 CATTCACTTCACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 2:4114201/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 2:1645885/50‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 2:60316/50‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 2:198640/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:1803979/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:1335533/50‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 2:3425532/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGACCCTGTACGCCTGGA < 2:2116051/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:4275249/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 2:234393/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:809182/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:1282387/50‑1 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:2876868/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:1757319/1‑49 TACATCAGAGATATACCATTCCATATAACTGCCCTGTACGCCTGGACGGA > 1:2097687/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 2:2031579/48‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 2:4344967/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:1836241/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:966024/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:889810/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 2:1972277/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:4133001/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:357607/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 2:1159160/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 2:368351/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:1970675/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 2:4060272/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:2732403/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 2:1398408/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:3463906/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:3104478/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:2670627/49‑1 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 2:4526529/1‑50 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 2:2972914/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 2:811816/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:3922261/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 2:2829073/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 2:1783296/1‑49 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 2:3807250/1‑50 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 2:655599/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:52210/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:3750810/1‑49 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 1:2181556/50‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 2:1570050/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 2:2609045/50‑1 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |