| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 147 [0] | [0] 145 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 125 (1.290) | 58/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 189 total aligned reads displayed.
CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 2:1716831/1‑50CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 2:4331804/1‑50 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:3909716/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG < 1:3977031/50‑1 GAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGT > 2:1947360/1‑49 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:1933489/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 2:3458648/1‑49 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 2:3587106/1‑49 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAA < 2:372374/50‑1 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:2841387/1‑48 GAGCAGATTGATCAAAAAATTTGCCGCACTAGGCCCGTATATTCGTGAAG < 2:3778286/50‑1 GAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAG < 1:1144044/50‑1 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:322237/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 1:1913882/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG > 2:959145/1‑50 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG < 2:447563/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:1740579/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:558220/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 2:1966650/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA < 2:4258531/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA < 1:2594999/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA < 1:1424582/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 2:1612661/1‑49 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 2:4508825/1‑49 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA < 2:3048533/50‑1 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 2:215298/1‑48 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT > 2:3672608/1‑50 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 2:3095452/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 2:3374741/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:966294/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:2178895/50‑1 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:3126193/50‑1 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:1319321/50‑1 TTGATCAAAAAATGTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 2:3159659/50‑1 TGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 2:575126/1‑49 TGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 2:2592077/1‑49 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:212206/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:3969686/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:614921/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA < 2:2019961/49‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 2:16743/1‑49 TCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAA < 2:1145181/50‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGA < 2:3298633/50‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAG < 1:1045123/49‑1 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 2:1179597/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT > 2:2735725/1‑50 AATTTACCGCACTAGGCCCGTATAGTCGTGAAGGTAAGTGCAAAGATAAT < 1:2859866/50‑1 ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC > 2:1026634/1‑50 ATTTACCGCACTAGGCCCGTATATTCGTGAAGGCAAGTGCAAAGATAATC > 1:626040/1‑50 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCG < 2:4202730/50‑1 TTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC > 1:1825848/1‑49 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGAT > 1:1203385/1‑50 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 1:2230336/49‑1 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGA < 2:307734/49‑1 ACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 1:3051839/1‑50 ACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT > 2:4087988/1‑50 ACCGCACTAAGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGAT < 1:577416/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:37843/49‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 1:530378/50‑1 CGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCT < 2:4109117/50‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT > 2:2605886/1‑50 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 2:1433394/50‑1 CACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTT < 2:2417940/50‑1 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT > 1:3307983/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 2:36494/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 1:2780755/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT < 2:2917961/50‑1 TAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 2:4313977/1‑50 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGA > 1:2370777/1‑50 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:1682280/49‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:2555336/48‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 2:616042/48‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:234081/48‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:4148779/48‑1 GCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT < 1:1870251/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:2360898/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 2:698830/1‑50 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG > 1:254967/1‑50 CGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGT < 1:3531688/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 1:838829/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 2:3957636/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 1:2278628/50‑1 TATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCT < 2:4173708/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG > 1:2945089/1‑50 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 2:2480725/50‑1 ATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC > 1:16085/1‑50 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG < 1:745694/49‑1 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG < 2:931402/49‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA > 1:2721794/1‑50 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA > 1:2647687/1‑50 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGT < 2:1226117/49‑1 GAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG > 1:2415754/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:37177/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 2:1287595/49‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 1:1044132/50‑1 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 2:1460222/1‑49 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA < 1:3391288/50‑1 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 2:3898241/1‑49 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 1:4367078/1‑49 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 2:2857817/1‑49 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |